KEGG   Equus caballus (horse): 100059606
Entry
100059606         CDS       T01058                                 
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
ecb  Equus caballus (horse)
Pathway
ecb03420  Nucleotide excision repair
ecb04120  Ubiquitin mediated proteolysis
ecb05161  Hepatitis B
ecb05170  Human immunodeficiency virus 1 infection
ecb05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100059606 (DDB1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100059606 (DDB1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    100059606 (DDB1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100059606 (DDB1)
   05161 Hepatitis B
    100059606 (DDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ecb04121]
    100059606 (DDB1)
   03400 DNA repair and recombination proteins [BR:ecb03400]
    100059606 (DDB1)
Ubiquitin system [BR:ecb04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Adoptor protein
     100059606 (DDB1)
DNA repair and recombination proteins [BR:ecb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      100059606 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      100059606 (DDB1)
SSDB
Motif
Pfam: MMS1_N CPSF_A Beta_propel
Other DBs
NCBI-GeneID: 100059606
NCBI-ProteinID: XP_001502072
Ensembl: ENSECAG00000012136
VGNC: 17069
LinkDB
Position
12:complement(24887696..24916593)
AA seq 1140 aa
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRE
TDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHAQELRQISHTEMEHEVAC
LDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSSSKLFSSSTATHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgtcgtacaactacgtggtaacggcacagaagcccactgccgtgaacggctgcgtgacc
ggacactttacttcagctgaagacctgaacctgttgattgccaaaaacacgaggttagag
atctatgtggtcaccgccgaggggcttcggcccgtcaaagaggtgggcatgtatgggaag
attgctgtcatggagcttttccggcccaagggggagagcaaagacctcctgtttatcctg
acagctaagtacaatgcctgcatcctggagtataagcagagtggcgagagcattgacatc
ataacgcgagcccatggcaatgtccaggaccgtatcggccgcccttcagagactggcatt
attggcatcattgaccctgagtgccggatgattggcctgcgactctatgatggccttttc
aaggttattcccctagaccgagacaataaagagctcaaggcctttaacatccgcctggag
gagttgcatgtcatcgacgtcaagtttctatatggttgccaagcacctaccatctgcttt
gtctaccaggaccctcaggggcggcacgtaaaaacctacgaggtgtctctccgagagaag
gaattcaataagggcccttggaaacaggaaaatgtagaagctgaagcttccatggtgatc
gcagtcccagagccctttggaggcgccatcatcattggacaggagtcaatcacctaccac
aacggtgacaaatacctggcgattgcccctcctatcatcaagcaaagcacgattgtgtgt
cacaatcgcgtggaccccaatggttcccgctatctcctgggagacatggaaggacggctc
ttcatgctgcttttggagaaggaggaacagatggatggcaccgtcaccctcaaggacctg
cgtgtggaactccttggagagacctctattgctgagtgcttgacgtacctcgataatggt
gttgtgtttgtcgggtctcgccttggtgactcccagcttgtgaagctcaatgttgacagc
aatgaacaaggctcctatgtagtggccatggaaacctttaccaatttaggacccattgtg
gacatgtgtgtggtggacctggagaggcaagggcagggacagctggtcacttgctctggg
gctttcaaggaaggttctttgcgcatcatccggaatggaattggaatccacgagcatgcc
agcattgacttaccaggcatcaaaggcctgtggccactgcggtctgatcctaaccgggag
actgatgacactttggtgctctcttttgtgggccagacaagagtcctcatgttaaacgga
gaggaggtggaagaaaccgaactgatgggtttcgtggatgatcagcagactttcttctgt
ggcaacgtggctcatcagcagcttatccagatcacttcagcatctgtgaggttggtctct
caagaacccaaagctctggtcagtgaatggaaggagcctcagggcaagaacatcagtgtg
gcctcctgtaacagcagccaggtagtggtggccgtgggaagggccctctactacctgcag
atccatgctcaggagctgcgacagatcagccatacagagatggaacacgaagtggcctgc
ttggacatcaccccattaggagacagcaatgggctgtcccctctctgtgccattggcctc
tggacagacatctcggcccgcatcttgaagctgccctcttttgaactactgcacaaagag
atgctgggtggagagatcattcctcgttccatcctgatgaccacctttgagagcagtcac
tacctcctttgtgccttgggagatggggcacttttctactttgggctcaacattgagaca
ggcctgttgagcgaccgtaagaaggtgactctgggcacccagcccacggtattgaggact
ttccgttctctttctaccaccaacgtctttgcttgctctgaccgccccactgtcatctac
agcagcaaccacaaattggtcttctccaatgtcaacctcaaggaagtgaactacatgtgt
cccctcaactcagatggctatcctgacagcctggcactggccaacaacagcaccctcacc
attggcaccatcgatgagatccagaagctgcacattcgcacagttcccctctacgagtct
cccaggaagatctgctatcaggaggtgtctcagtgcttcggggtcctctccagccgcatc
gaagtgcaggacgccagtgggggcacaactgctctcaggcccagcgccagcacccaggcc
ctgtctagcagcgtcagctccagtaagctgttctccagcagcacagccactcacgagacc
tcctttggagaagaggtggaggtgcataacctcctgatcattgaccagcacaccttcgaa
gtgcttcatgcccaccagtttctgcagaacgagtatgccctcagcctggtctcctgcaag
ttgggcaaggaccccaacacgtacttcattgtgggcacagccatggtgtatcccgaggag
gcggagcccaagcagggtcggattgtggtctttcagtattcggatggaaaactacagact
gtggctgaaaaggaagtgaaaggggctgtgtactctatggtggaatttaacgggaagctg
ttagccagcatcaatagcacggtgcggctttacgagtggacgacagagaaggagctgcgc
acggagtgcaatcactacaacaacatcatggccctctacctgaagaccaagggcgacttc
atcctggtgggcgacctgatgcgctccgtgctgctgctcgcctacaagcccatggaggga
aacttcgaagagattgctcgagactttaaccccaactggatgagtgctgtggaaatcttg
gacgatgacaatttcctgggggctgaaaatgcctttaacttgtttgtgtgtcagaaggat
agcgctgccaccactgatgaggagcggcaacaccttcaggaggtcgggctcttccacctg
ggcgagtttgtcaatgtcttttgccacggctctctggttatgcagaatctgggtgaaact
tccacccccacacagggctcagtcctcttcggcaccgtcaatggcatgattgggctggtg
acctcactgtcagagagctggtacaacctcctgttggacatgcagaatcgactcaataaa
gtcatcaaaagtgtgggcaagatcgagcactccttctggagatcctttcatacagagcga
aagacagaaccagccacaggcttcatcgatggagacttgattgagagtttcctggatatc
agccggcccaagatgcaggaggttgtggcaaacctacagtatgatgatggcagtggaatg
aagcgagaggccaccgcagacgacctgatcaaggttgtggaggagctaactcggatccat
tag

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