Equus caballus (horse): 100060844
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Entry
100060844 CDS
T01058
Symbol
PRDM16
Name
(RefSeq) PR domain zinc finger protein 16 isoform X1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
ecb
Equus caballus (horse)
Pathway
ecb00310
Lysine degradation
ecb01100
Metabolic pathways
ecb04714
Thermogenesis
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100060844 (PRDM16)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100060844 (PRDM16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecb03000
]
100060844 (PRDM16)
03036 Chromosome and associated proteins [BR:
ecb03036
]
100060844 (PRDM16)
Enzymes [BR:
ecb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
100060844 (PRDM16)
Transcription factors [BR:
ecb03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100060844 (PRDM16)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100060844 (PRDM16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
PRDM2_PR
zf-C2H2_jaz
zf-C2H2_6
SET
zf-C2H2_11
zf-H2C2_5
Zap1_zf1
zf-BED
Motif
Other DBs
NCBI-GeneID:
100060844
NCBI-ProteinID:
XP_023483282
Ensembl:
ENSECAG00000017045
VGNC:
21815
LinkDB
All DBs
Position
2:complement(46870893..47216430)
Genome browser
AA seq
1276 aa
AA seq
DB search
MRSKARARKLAKSDGDIVNNMYEPDPDLLAGESAEDETEESIMSPIPMGPPSPFPTSEDF
TPKEGSPYEAPVYIPEDIPIPPDFELRESSIPGAGLGIWAKKKMEIGERFGPYMVAPQAT
LKEAGFGWEQMLTDAEVSTQEGCIQKISEDLGSEKFCVDANQAGAGSWLKYIRVACSCDD
QNLTMCQINEQIYYKVIKDIEPGEELLVHVKEGAYSLGTVPPNLDEEPTFRCDMCDELFQ
SKLDLRRHKKYACSSVGAALYQGLGEELKPEGVGGTGSDGQAHECKDCERMFPNKYSLEQ
HMIVHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECENCVKVFTDPSNLQRHIRS
QHVGARAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEVCHKSYTQFSNLCRHKRMHAD
CRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHYPPGGIFAPGLPLTPSPMMDKAKPPPNL
NHASLGFNEYFPSRPHPGSLPFSAAPPAFPALTPGFPGIFPPSLYPRPPLLPPTPLLKSP
LNHTQDAKLPSPLGNPALPLVSAVGNSGQGATAASGPEEKFESRLEDSYAEKLKTRSSDM
SDGSDFEDVNTTTGTDLDTTTGTGSDLDSDVDSDRDKAKAKGKAAEGKAECGGGTAPPGA
PNSVGEVPLFCSQHSFFPPPDEQLLTASGAAGDSIKAIASIAEKYFGPGFVGMQEKKLGA
LPYHSVFPFQLLPNFPHALYPFTDRTLTHNLLVKAEPKSPRDALKVGGPSAESPFDLTTK
PKEAKPILPVPKVPPAPASGEEQPLDLSIGSRVRASQNGGGREPRKNHVYGERRLGAGEG
LPKVCPAQLPQQPSLHYAKPSPFFMDPIYSRVEKRKVTDPVGVLKEKYLRPSPLLFHPQM
SAIETMTEKLESFAALKADSGSSLQPLPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGK
IFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFG
QQTNLDRHLKKHEHEHVPVSQHAGVLTNHLGTSASSPTSESDNHALLDEKEDSYFSEIRN
FIANSEMNQASTRTDKRPEVQDLDGSSQCPGLASGKPEDEEEEEEELEEDDDDSLAGKSQ
DDTVSPTPEPQGAYEDEDEEPPTSLAVGFDHTRRCVEEQPSGLLALEPVPTFGKGLDLRR
AAEEAFEVKDVLNSTLDSEALKQTLYRQAKNQAYAMMLSLSEDAPLHTSSQSPLDAWLNI
SGATPESGAFNPINHL
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgcgatccaaggcgagggcgaggaagctagccaaaagtgacggcgacattgtaaataat
atgtatgagcctgacccggacctgctggctggcgagagtgccgaggacgagaccgaggag
agcatcatgtcccccatccccatggggccgccgtcccccttccccaccagcgaggacttc
acccccaaggagggctcgccgtacgaggcccctgtctacattcctgaggacattcccatc
cctccagactttgagctccgagagtcctccatcccaggggccggcctggggatctgggcc
aagaagaagatggaaatcggggagaggtttggcccttacatggtggcgccccaggccacg
ttgaaggaggcaggctttggatgggagcaaatgctgactgatgcggaagtgtcgacacag
gagggctgcatccaaaagatctccgaagacctgggcagtgagaagttctgtgtggatgct
aatcaggccggggctggcagctggctcaagtacatccgtgtggcatgctcctgcgatgac
cagaacctcaccatgtgtcagatcaacgagcagatttattataaagtcattaaggacatt
gagccaggagaagagctgctggtgcatgtgaaggaaggtgcctactcgctggggacggtg
ccccccaatctggatgaggagcccacgttccgctgtgacatgtgtgatgagctcttccag
tccaagctggacctgcggcgtcacaagaagtacgcatgcagctcggtgggggccgcgctc
taccagggcctgggcgaggagctcaagccggagggcgtgggtggcacgggcagcgacggg
caggcccacgagtgcaaggactgcgagcggatgttcccgaacaagtacagcttggagcag
cacatgatcgtgcacacagaggagcgagagtacaagtgtgaccagtgtcccaaggccttc
aactggaagtccaacctcatccgccaccagatgtcccacgacagcggcaagcgcttcgaa
tgtgaaaactgcgtgaaggtgttcacggaccccagcaacctgcagcggcacatccgctcc
cagcacgtgggcgcgcgggcgcacgcctgccccgactgcgggaagaccttcgccacatcc
tcgggcctcaagcagcacaagcatatccacagcaccgtcaagcctttcatatgtgaggtc
tgccacaaatcctacacgcagttctccaacctgtgccggcacaagcggatgcacgccgac
tgccgcacgcagatcaagtgcaaggactgtgggcagatgttcagcactacctcctccctc
aacaagcaccggcgcttctgcgagggcaagaaccattacccgccaggcggcatcttcgcc
ccgggcctgcccctcacccccagccccatgatggacaaggccaagccccctcccaacctc
aaccacgccagcctgggcttcaatgagtacttcccctccaggccgcacccagggagcctg
cccttctccgcggcgcccccggcgttccccgcgctcacccccggcttcccgggcatcttc
cctccgtccctgtacccccggccgcccctgctacctcccacgccgctgctcaagagcccc
ctgaaccacacccaggatgccaagctccccagccccctggggaacccggccctacccctc
gtctccgccgtcggcaacagcggccagggcgccacggcagcctcggggcccgaggagaag
ttcgagagccgcctcgaggactcatacgccgagaagctcaagacccggagcagcgacatg
tcggacggcagcgacttcgaggacgtcaacaccacgacggggaccgacctggacacgacc
acagggacgggctcggacctggacagcgacgtggacagcgaccgcgacaaggccaaggcc
aagggcaaggcggccgagggcaaggccgagtgtgggggcggcacagctcccccgggggcc
ccgaacagcgtgggcgaggtgcccctcttctgttcccagcactccttcttcccgccaccc
gacgagcagctgctgacggcgtcgggggccgcgggcgactccatcaaggccatcgcctcc
atcgcggagaagtacttcgggcccggcttcgtgggcatgcaggagaagaagctgggcgcg
ctgccctaccactccgtgttccccttccagctcctgcccaacttcccccacgccctctac
cccttcacggaccgcacactcacccacaacttgctggtcaaggctgagccaaagtcaccc
cgggatgccctcaaggtgggcggccccagtgccgagtccccctttgacctcaccaccaaa
ccaaaagaggccaagcccatcctgcccgtgcccaaggtgcccccggcgcccgcatctgga
gaggagcagccgctggacctgagcatcggcagccgcgtccgagccagccagaacggaggg
ggccgggagccccgcaagaaccacgtgtatggcgagcgcaggctgggtgccggtgagggg
ctgcccaaggtgtgcccggcgcagctgccccagcagccgtcgctgcactacgccaagccg
tcgcccttcttcatggaccccatctacagcagggtggagaagcggaaggtgacagacccc
gtgggagtcctgaaggagaagtacctgcggccgtccccgctgctcttccacccccagatg
tcagccatcgagaccatgacagagaagctggaaagcttcgcggccctgaaggcggactcg
ggcagctccctgcagccccttccccaccaccccttcaacttccggtccccgcccccgacg
ctctcggaccccatcctcaggaagggcaaggagcgatacacgtgcaggtactgtggcaag
atcttcccccgatcagcaaacctcacgagacacctgaggacgcacaccggggagcagccg
tacaggtgtaagtactgcgaccgctccttcagcatctcctccaaccttcagcggcatgtc
cggaacattcacaacaaggagaagccattcaaatgtcacctgtgtaaccggtgcttcggg
cagcagaccaacctggacagacacctcaagaagcacgaacacgagcatgtgccagtgagc
cagcacgccggggtcctcacgaaccacctggggaccagcgcctcctctcccacctccgag
tcggacaaccacgcacttttagacgagaaagaagactcctatttctctgaaatcagaaac
tttattgccaatagtgagatgaaccaagcgtcaacgcgaacagacaaacggccagaagtc
caggacctggacggcagctcccagtgtccaggcttggccagcgggaagccagaggatgaa
gaggaggaggaggaggagctggaggaggacgatgacgacagtctggcggggaagtcccag
gacgacactgtgtcccccacgcctgagccccagggtgcctacgaggacgaggacgaggag
cctcccacctccctggctgtgggcttcgaccacacccgaaggtgtgttgaggagcagccg
agcggtctgttagctttggagcccgtgccgacttttgggaaggggctggatctccgcaga
gcagctgaggaagcgtttgaagttaaagatgtgcttaattccaccctagattctgaggct
ttaaaacagaccctgtacaggcaggctaagaaccaggcgtatgcaatgatgctgtccctt
tcggaggatgctcctctccatacctcctcccagagccctctggacgcttggttgaacatc
tcgggagccacaccggagtccggagcctttaaccccatcaaccacctctga
DBGET
integrated database retrieval system
