Equus caballus (horse): 100061303
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Entry
100061303 CDS
T01058
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X3
KO
K08525
retinoid X receptor beta
Organism
ecb
Equus caballus (horse)
Pathway
ecb03320
PPAR signaling pathway
ecb04659
Th17 cell differentiation
ecb04919
Thyroid hormone signaling pathway
ecb04920
Adipocytokine signaling pathway
ecb04928
Parathyroid hormone synthesis, secretion and action
ecb05200
Pathways in cancer
ecb05202
Transcriptional misregulation in cancer
ecb05207
Chemical carcinogenesis - receptor activation
ecb05216
Thyroid cancer
ecb05222
Small cell lung cancer
ecb05223
Non-small cell lung cancer
ecb05226
Gastric cancer
ecb05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
100061303 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
100061303 (RXRB)
03320 PPAR signaling pathway
100061303 (RXRB)
04919 Thyroid hormone signaling pathway
100061303 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
100061303 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100061303 (RXRB)
05202 Transcriptional misregulation in cancer
100061303 (RXRB)
05207 Chemical carcinogenesis - receptor activation
100061303 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
100061303 (RXRB)
05216 Thyroid cancer
100061303 (RXRB)
05222 Small cell lung cancer
100061303 (RXRB)
05223 Non-small cell lung cancer
100061303 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100061303 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecb03000
]
100061303 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ecb03310
]
100061303 (RXRB)
Transcription factors [BR:
ecb03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
100061303 (RXRB)
Nuclear receptors [BR:
ecb03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
100061303 (RXRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
100061303
NCBI-ProteinID:
XP_014589828
Ensembl:
ENSECAG00000023041
VGNC:
22640
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All DBs
Position
20:complement(34544995..34551795)
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AA seq
440 aa
AA seq
DB search
MPQGSVGRWGCEKKCIVGSRPGGGGDGPGWIPRQQRRRREPENNKPRSRSRGRLDGTGWA
TAGGINSTVSLPGGGSGPPEDVKPPVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHY
GVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQE
ERQRGKDKDGDGEGAGGAPEEMPVDRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVT
NICQAADKQLFTLVEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILL
ATGLHVHRNSAHSAGVGAIFDRSLSRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKG
LSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLI
GDTPIDTFLMEMLEAPHQLA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagggcagtgtgggccggtgggggtgcgaaaagaaatgcattgtggggtcgcgt
cccggtggcggcggcgacggccctggctggatcccgcggcagcagcggcggcggcgggag
ccggagaacaacaaaccccggagccggagccgggggaggctggacgggacgggatgggcg
acagcgggcgggattaactcaacagtgtcgctccctgggggtgggtctggcccccctgaa
gatgtgaagccaccagtcttaggggtccggggcctgcactgtccaccccctccaggtggc
cctggggctggcaaacggctatgtgcaatctgcggggaccgaagctcaggcaaacactat
ggggtttacagctgtgagggctgcaaaggcttcttcaagcgcaccatccggaaggacctg
acctactcgtgccgggacaacaaagactgtacggtggacaagcgccagcggaaccgctgt
cagtactgccgctatcagaagtgcctggccacgggcatgaagagggaggcggtacaggag
gagcgtcagcgggggaaggacaaggatggggatggggagggggctggaggagcccctgaa
gagatgcccgtggacaggatcctggaggcagagctggctgtggagcagaagagtgaccag
ggcgttgagggtcctgggggaaccgggggtagcggcagcagcccaaatgaccctgtgact
aacatctgtcaggcagctgacaaacagctattcacgcttgttgagtgggcaaagaggatc
ccacacttttcctccttgcctctggatgaccaggtcatattgctacgggcaggctggaat
gaactcctcattgcctccttttcccaccgatccattgatgtccgagatggcatcctcctc
gccacaggtcttcacgtgcaccgcaactcagcccattctgcaggcgtgggagccatcttt
gatcggtccctctccagggtgctgacagagctagtgtccaaaatgcgtgacatgaggatg
gacaagacagagcttggctgcctgagggcaatcattctgttcaatccagatgccaagggc
ctctccaaccccagtgaggtagaggtcctgcgagagaaagtgtatgcatcactggagacc
tactgcaaacagaagtaccctgagcagcagggacggtttgccaaactgctgctacgtctt
cctgccctcaggtccatcggccttaagtgtctagaacatctgtttttcttcaagctcatt
ggtgacacccccatcgacacctttctcatggagatgctcgaggctccccatcagctggcc
tga
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