Equus caballus (horse): 100062160
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Entry
100062160 CDS
T01058
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
ecb
Equus caballus (horse)
Pathway
ecb04151
PI3K-Akt signaling pathway
ecb04510
Focal adhesion
ecb04512
ECM-receptor interaction
ecb04820
Cytoskeleton in muscle cells
ecb04926
Relaxin signaling pathway
ecb04933
AGE-RAGE signaling pathway in diabetic complications
ecb04974
Protein digestion and absorption
ecb05146
Amoebiasis
ecb05165
Human papillomavirus infection
ecb05200
Pathways in cancer
ecb05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100062160 (COL4A4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100062160 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100062160 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100062160 (COL4A4)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
100062160 (COL4A4)
09154 Digestive system
04974 Protein digestion and absorption
100062160 (COL4A4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100062160 (COL4A4)
09162 Cancer: specific types
05222 Small cell lung cancer
100062160 (COL4A4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100062160 (COL4A4)
09174 Infectious disease: parasitic
05146 Amoebiasis
100062160 (COL4A4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100062160 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecb04147
]
100062160 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
ecb00536
]
100062160 (COL4A4)
Exosome [BR:
ecb04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100062160 (COL4A4)
Glycosaminoglycan binding proteins [BR:
ecb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100062160 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100062160
NCBI-ProteinID:
XP_023498216
Ensembl:
ENSECAG00000011138
VGNC:
16741
LinkDB
All DBs
Position
6:complement(15162183..15279312)
Genome browser
AA seq
1686 aa
AA seq
DB search
MAFIRCSFRWTKPLAIDPWSLILILFSVQHVYGSGKKFIGPCGGRDCSACRCFPEKGSRG
QPGLPGLQGPIGPLGPPGPIGIPGEKGRRGDSGPPGAAGDKGDKGPTGVPGFPGLDGIPG
HPGPPGPRGTPGINGYNGSRGDPGLPGERGAPGPGGPPGLPGANGEKGNSVFIFGAIKGI
QGDRGDPGPPGLPGSRGSRGPVGPVGYPGAPGLTGPPGHPGSPGLKGNPGVGVKGQMGDP
GEIGQQGSPGPTLLVQPPDFSLYKGEKGIKGMPGMIGPPGPPGPKGVPGTGEKGEKGVPG
FPGPRGNPGSYGSPGFPGLKGEPGLSGEPGPFGFLGPKGDPGYRGDPGPPGVLTTPSLPL
KGPPGDPGFPGRHGEVGAIGPPGPPGHSGSPGEACAGMMGPPGPRGFPGHPGFPGAAGIP
GRADSAPGKSGNPGPPGLPGAPGRQGPPGSDAIYCTAGHPGPQGMKGKVGPPGRRGSKGE
KGSMGLCACQPGPMGPPGPPGLPGRQGSKGDLGLPGWLGEKGYPGPPGAEGSPGPPGKPG
ASGLPGSKGEKGDMVVSRVKGRKGERGPDGPPGFPGQQGQHGRDGRAGEKGDPGPPGDHE
AAAPGDRGFPGPPGPPGRAGPRGPPGLGFPGLPGQRGPPGAPGRPGSRGPEGVKGQKGDT
IPCNVTYPGRPGPPGFDGPPGPKGFPGPRGAPGLRCLDGVKGQRGQPGLSEIPGPPGFRG
DIGDPGLRGEKGSSPVGPPGSPGSPGVNGQKGIPGDPAYGHPGPPGRRGPSGMPGLKGLR
GDPGRPGAAGPAGMPGFPGLKGPKGREGSAGFPGIPGPPGHSCERGAPGIPGQPGLPGAP
GSPGAPGWKGQRGDVGPPGPAGMKGLPGVPGRPGADGPLGPPGVPGPFGDDGLPGLPGPK
GLQGLPGFPGFPGERGKPGPEGQPGRKGEIGEKGWPGFLGDPGLRGAKGSRGPPGDEGEV
VIIPRKGETGDPGPPGDGGFPGEGGDKGNPGMQGSRGEPGRHGPPGFHRGEPGRNGQPGL
PGPPGPPGSPGLRGIIGFPGFPGDQGQPGSPGPPGLSGVDGRRGPKGNKGDLASQFGPPG
PNGEPGSPGCPGHFGAPGEQGLPGVQGSRGPPGRPGLPGSSGPPGCPGNQGVPGLEGHPG
EMGDPGPRGLMGDPGTPGLPGIKGPPGSPGLNGLHGLKGQKGSEGASGLHEVGPRGPVGI
PGLKGETGDPGSPGISPPGLFGEKGPPGPPGRPGPPGPAGATGRAPTGDIPDSGPPGDQG
PPGPDGLRGTPGPPGPPGSVDLLRGEPGDRGLPGPPGPPGPPGPPGHKGFPGCDGKDGQK
GPMGFPGPPGPPGLPGPPGEKGLLGPPGRQGPSGPPGSRGEPGPPADVDSCPRIPGLPGV
PGPRGPEGEMGPPGMRGPPGPGCKGEPGLDGRRGEDGIPGSPGPPGHKGDMGEAGCPGAP
GPPGPTGDPGPKGLGPGYLSGFLLVLHSQTDGEPTCPVGMPKLWTGYSLLYLEGQEKAHN
QDLGLAGSCLPVFSTLPFAYCNIHQVCHYAQRNDRSYWLASAAPLPMMPLSEEEIRPYIS
RCAVCEAPAQAVAVHSQDQSIPACPRTWKSLWIGYSFLMHTGAGDQGGGQALMSPGSCLE
DFRAAPFLECQGRQGTCHFFANEYSFWLTTVKPDLEFSSAPSPDTLKESQAQRQKISRCQ
VCLKYG
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atggcatttataagatgctctttcaggtggaccaagcccttggccatagatccctggtca
cttatactcattctcttttctgtacaacatgtgtatgggagcggaaagaagtttattggt
ccttgtggaggaagagattgctctgcttgccggtgttttcctgaaaaggggtctaggggt
caacccggactcccagggttgcagggccctattggacccctgggacctccaggacccatt
ggaattccaggagagaaagggaggagaggtgacagtggccctcctggagcagcaggtgac
aaaggagataagggtccaactggtgtccccggatttccaggtttagacggcatacctggg
cacccaggccctcctggacccagaggcacacctggcataaatggctacaatggctcaaga
ggtgatccagggcttccaggagaaagaggcgctcctggcccaggaggccccccaggcctt
cctggggcaaatggagaaaaaggaaattcagtcttcatttttggtgccattaaaggtatt
cagggtgacagaggggacccaggacctcctggcttaccaggatcaaggggctccagagga
ccagtgggcccagtgggatatccgggagcgccggggttaacaggacctccgggccatcct
gggagtccaggtttgaagggtaatcctggcgtgggagtaaaggggcaaatgggagacccg
ggtgagattggccagcaaggttctccgggacccaccctgttggtacagccacctgatttt
agtctctataaaggagaaaagggtataaaaggaatgcctggaatgattggacctccggga
cctcctggacccaagggagtccctggtactggagaaaaaggagagaaaggtgttcctggg
tttccaggacctcggggtaaccctggttcctatggatctccaggttttccaggattaaag
ggggaaccaggactgtctggagagcctgggccatttggatttcttggtccaaagggggat
cctggatatcgcggggacccagggccaccaggtgttttgacaactccctctcttccactg
aaaggccctccaggggatccagggtttcctggccgccatggagaagtgggggctattgga
ccacctggtccccctggtcactcaggtagcccaggggaagcctgtgcaggcatgatggga
ccccctgggccacgagggtttcctggtcatccaggatttccaggggcagctggtattcct
gggagagctgattctgctccaggaaagtcagggaacccgggaccacctgggttgcctgga
gcaccagggcggcagggacctccaggatcagacgctatatattgtactgctgggcaccct
ggaccacaaggaatgaaaggcaaagtgggtcctccaggaagaagaggctcaaaaggtgaa
aaaggaagcatggggctctgtgcctgccagcccggtcccatgggcccaccaggccctcca
ggacttcctgggaggcagggtagtaagggagacttgggcctccctgggtggcttggagaa
aaaggttacccaggccctcctggtgcagaaggatctccagggccaccaggaaaacctggt
gcttcaggactacctggcagcaaaggagaaaagggcgacatggttgtatcaagagttaaa
gggcgcaaaggagaaagaggtcctgatgggcccccaggatttccaggacagcaaggacaa
catggtcgggatggtcgcgctggagaaaaaggggatccaggacccccaggggatcatgaa
gctgcagccccaggtgatcgagggtttcctggaccgccgggcccacctggcagagcagga
cctaggggtcctccaggactgggatttcctggtctaccgggacagagagggccaccagga
gctccaggccgcccgggcagcaggggccctgagggcgtgaagggtcagaaaggtgataca
attccttgtaacgtaacctacccagggaggccaggccctccaggctttgatggacctcca
ggtccaaagggatttccaggtcctcggggcgctcctgggctgaggtgtttggatggggtt
aaaggtcagcgtggccaaccaggactatcagaaatacctggtccacctggctttcgtggt
gacataggcgatccaggtcttagaggtgaaaaggggtcctcccctgtggggcccccaggc
tctccagggtcacctggggtgaatggtcagaaaggaattcccggagaccctgcttatggc
cacccaggacccccgggaaggaggggtccttcagggatgccagggttgaaaggactcaga
ggtgatccaggacgtccaggagctgcagggccagctggcatgcccggattcccgggtctc
aaaggtcccaaaggcagagagggaagtgctgggtttccaggtatcccaggtccacctggc
cattcctgtgaaagaggcgctccagggatcccagggcaaccgggcctccctggggctcca
ggcagtccaggtgccccaggttggaaaggacagcgaggggatgtggggcctcctggacca
gctggaatgaagggcctccctggagtcccgggacggcctggggcagacggacccctggga
ccaccaggagtcccaggcccctttggggatgatggactacctggccttccaggcccaaag
ggactccaggggctgcctggcttcccagggtttccaggagagagaggaaagcctggtcca
gagggacaacctggccgaaagggagaaattggagagaagggttggcctggcttcctggga
gacccgggactgagaggagccaaaggatcgagaggacccccaggagatgaaggagaagtg
gttataattcccagaaagggggaaaccggggatcctggacctcctggagatggtggattc
ccaggagaaggaggtgataaaggcaatcctgggatgcaagggagcagaggagagccggga
agacacggaccacctggatttcacagaggagagcctggtagaaatgggcagccggggctt
cctggacccccaggccctccaggctccccggggctgagagggatcattggttttccagga
tttccaggtgaccagggtcagccgggttctccagggccccctggactttcaggagttgat
ggaaggagaggacctaaaggaaacaaaggtgaccttgcaagtcagtttggcccccctggt
ccaaatggtgagccaggtagccctggatgtccaggacattttggagctcctggagagcag
ggcttgcctggtgttcaaggatccaggggaccacctggaagaccaggactgcctggctcc
tctggaccaccagggtgtccaggtaatcaaggggtgcctgggctggaaggacatccagga
gagatgggggatcctgggccaagaggcctcatgggggatccagggacaccaggtcttccg
ggaataaaaggtcccccagggtcacccggcctgaatggcttgcatggtttaaagggtcag
aaaggaagcgaaggcgcttcaggtttgcatgaagtgggtccacgcggcccagtgggaata
cctgggctgaaaggggagacgggagaccccgggagcccaggaatttctcctccagggctt
tttggagaaaaaggtcctccagggcccccagggagacctggaccacctggccctgcaggt
gccacaggaagagctcctacgggtgacattcctgactcgggtccacctggagatcaggga
cctcctggccccgatggtctgagaggaacacctgggcctcccggcccccctgggagtgtc
gaccttctgagaggggaaccaggtgaccgtggtcttccagggccaccaggtcccccaggc
cccccaggccctccaggacacaaaggcttcccagggtgtgatggaaaagacggccagaaa
ggacccatgggattcccggggccgccggggccacctggacttcctgggccacctggagag
aagggtttgctgggacctccagggagacaggggccctctggccctccgggttccagaggt
gaacctgggccacctgcagatgtggattcctgcccccgaatcccggggcttcctggggta
ccaggcccaagaggcccagaaggagagatggggccccctggaatgaggggccccccagga
ccagggtgcaaaggagagcctgggctggatggcaggaggggcgaggatggcatccctggg
tctcccgggcctccaggacacaaaggtgacatgggagaagctggctgccctggagcacca
ggccctcctgggcccactggggatcctgggcccaaagggcttggccctggatacctcagt
ggcttcctcctggttctccacagtcagacagatggagagcccacctgccccgtgggcatg
cccaagctctggacgggctatagtctgttatacctggaagggcaggagaaagctcacaat
caagacctcggcctggcgggatcttgccttcctgtgtttagtacactgccctttgcctac
tgcaacatccaccaagtgtgccactatgcccagagaaatgacagatcctattggctggcc
agcgctgcacccctgcccatgatgccactctcggaagaggagatccgcccctacatcagc
cgctgtgctgtgtgtgaggccccggctcaggcggtggcggtgcacagccaggaccagtcc
atccccgcgtgtccgcggacctggaagagcctttggatcgggtactcattcctgatgcac
acaggagctggggaccaaggaggagggcaggccctcatgtcacctggcagctgcctggag
gacttcagagcggcaccattccttgaatgccaaggccggcagggcacttgccactttttt
gcaaatgagtatagcttctggctgacaacagtgaaacccgacttggagttctcctcggca
ccatcaccagacaccttaaaagaaagccaggcccagcgccagaaaatcagcaggtgccag
gtctgtctgaagtatggctag
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