KEGG   Equus caballus (horse): 100065431
Entry
100065431         CDS       T01058                                 
Symbol
POLR2E
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
ecb  Equus caballus (horse)
Pathway
ecb03020  RNA polymerase
ecb03420  Nucleotide excision repair
ecb04623  Cytosolic DNA-sensing pathway
ecb05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100065431 (POLR2E)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100065431 (POLR2E)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    100065431 (POLR2E)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    100065431 (POLR2E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ecb03021]
    100065431 (POLR2E)
   03400 DNA repair and recombination proteins [BR:ecb03400]
    100065431 (POLR2E)
Transcription machinery [BR:ecb03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     100065431 (POLR2E)
  RNA polymerase III system
   RNA polymerase III
     100065431 (POLR2E)
  RNA polymerase I system
   RNA polymerase I
     100065431 (POLR2E)
DNA repair and recombination proteins [BR:ecb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100065431 (POLR2E)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C
Other DBs
NCBI-GeneID: 100065431
NCBI-ProteinID: XP_001496313
Ensembl: ENSECAG00000011124
VGNC: 21677
LinkDB
Position
7:complement(526268..531785)
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVA
RYFGIKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgacgaggaggagacttaccggctgtggaagatccgcaagaccatcatgcagctg
tgccacgaccgtggctacctggtgacgcaggacgagctggaccagacgctggaggagttc
aaggcccagttcggggacaagccgagtgaagggcggccgcggcgcacggacctcaccgtg
ctggtggcccacaatgacgaccccaccgaccagatgttcgtcttcttcccggaggagccc
aaggtgggcatcaagaccatcaaggtgtactgccagcgcatgcaggaggagaacatcacc
cgggccctcatcgtggtgcagcagggcatgacgccctccgccaagcagtccctggtcgac
atggcccccaagtacatactggaacagtttctgcagcaggagctgctcatcaacatcacg
gagcacgagctggtcccggagcacgtcgtcatgaccaaggaggaggtgacggagctgctg
gcccggtataagctgcgcgagaaccagctgcccaggatccaggccggagaccccgtggcg
cgctacttcgggataaagcgagggcaggtggtgaagatcatccggcccagcgagacggcg
ggcaggtacatcacctaccggctggtgcagtag

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