Equus caballus (horse): 100069096
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Entry
100069096 CDS
T01058
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
KO
K08524
retinoid X receptor alpha
Organism
ecb
Equus caballus (horse)
Pathway
ecb03320
PPAR signaling pathway
ecb04148
Efferocytosis
ecb04151
PI3K-Akt signaling pathway
ecb04659
Th17 cell differentiation
ecb04919
Thyroid hormone signaling pathway
ecb04920
Adipocytokine signaling pathway
ecb04928
Parathyroid hormone synthesis, secretion and action
ecb04932
Non-alcoholic fatty liver disease
ecb04976
Bile secretion
ecb05160
Hepatitis C
ecb05200
Pathways in cancer
ecb05202
Transcriptional misregulation in cancer
ecb05207
Chemical carcinogenesis - receptor activation
ecb05216
Thyroid cancer
ecb05222
Small cell lung cancer
ecb05223
Non-small cell lung cancer
ecb05226
Gastric cancer
ecb05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100069096 (RXRA)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100069096 (RXRA)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
100069096 (RXRA)
09152 Endocrine system
04920 Adipocytokine signaling pathway
100069096 (RXRA)
03320 PPAR signaling pathway
100069096 (RXRA)
04919 Thyroid hormone signaling pathway
100069096 (RXRA)
04928 Parathyroid hormone synthesis, secretion and action
100069096 (RXRA)
09154 Digestive system
04976 Bile secretion
100069096 (RXRA)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100069096 (RXRA)
05202 Transcriptional misregulation in cancer
100069096 (RXRA)
05207 Chemical carcinogenesis - receptor activation
100069096 (RXRA)
09162 Cancer: specific types
05226 Gastric cancer
100069096 (RXRA)
05216 Thyroid cancer
100069096 (RXRA)
05222 Small cell lung cancer
100069096 (RXRA)
05223 Non-small cell lung cancer
100069096 (RXRA)
09172 Infectious disease: viral
05160 Hepatitis C
100069096 (RXRA)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100069096 (RXRA)
09167 Endocrine and metabolic disease
04932 Non-alcoholic fatty liver disease
100069096 (RXRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecb03000
]
100069096 (RXRA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ecb03310
]
100069096 (RXRA)
Transcription factors [BR:
ecb03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
100069096 (RXRA)
Nuclear receptors [BR:
ecb03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
100069096 (RXRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
100069096
NCBI-ProteinID:
XP_005605975
Ensembl:
ENSECAG00000019365
VGNC:
22639
LinkDB
All DBs
Position
25:36961288..37063701
Genome browser
AA seq
439 aa
AA seq
DB search
MAAPSLHPSLGPGMGSSLGSPGQLHSPISSLSSPINGMGPPFSVISSPMGPHSMSVPTTP
TLGFGTGSPQLNSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSS
GKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE
AVQEERQRGKDRNENEVESTSSANEDMPVEKILEAELAVEPKTEAYVEANVGLNPSSPND
PVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDG
ILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGL
SNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIG
DTPIDTFLMEMLEAPHQMT
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggccgccccctcgctgcacccctccctagggcctggcatgggctcctcgctcggctcc
cccggacagctgcactcgcccatcagctccttgagctcgcccatcaacggcatgggcccg
cccttctccgtcatcagctcccccatgggcccccactccatgtccgtgcccaccacacct
accctgggcttcggcactggcagcccccagctcaactcgcccatgaaccccgtcagcagc
agcgaggacatcaagcccccgctgggcctgaacggcgtcctcaaggtcccggcccacccc
tcagggaacatggcatccttcaccaagcacatctgtgccatctgcggggaccgctcctca
ggcaagcactacggggtgtacagctgcgagggctgcaagggcttcttcaagcggacggtg
cgcaaggacctgacctacacctgccgggacaacaaggactgtctgatcgacaagcggcag
cgcaaccgctgccagtactgccgctaccagaagtgcctggccatgggcatgaagcgggaa
gccgtgcaggaggagcggcagcggggcaaggacaggaatgagaatgaggtggagtccacg
agcagcgcaaacgaggacatgccggtggagaagatcctagaggctgagctggctgtggag
cccaagactgaggcatacgtggaggcgaacgtggggctgaaccccagctcgcccaacgac
cctgtcaccaacatctgccaggcagcggacaagcagctcttcaccctggtggagtgggcc
aagcggatcccgcacttctccgagctgcccctggacgaccaggtcatcctgctgcgggca
ggctggaacgagctgctcatcgcctccttctcccaccggtccatagctgtgaaggacggg
atcctgctcgccaccgggctgcacgtgcaccggaacagcgcccacagcgcgggggtgggc
gccatcttcgacagggtgctgacggagcttgtgtccaagatgcgcgacatgcagatggac
aagacggagctgggctgcctgcgtgccatcgtcctcttcaacccggactccaaggggctc
tcgaacccggccgaggtggaggccctgcgggagaaggtctacgcgtccctggaggcctac
tgcaaacacaagtaccccgagcagccgggaaggttcgccaagctgctgctgcgcctgcct
gccctgcgctccatcggcctcaagtgcctggaacatctcttcttcttcaagctcattggg
gacacgcccatcgacaccttcctcatggagatgctggaagccccgcaccaaatgacttag
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