Equus caballus (horse): 111769285
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Entry
111769285 CDS
T01058
Symbol
SOX4
Name
(RefSeq) transcription factor SOX-4
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
ecb
Equus caballus (horse)
Pathway
ecb05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
111769285 (SOX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecb03000
]
111769285 (SOX4)
Transcription factors [BR:
ecb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
111769285 (SOX4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
111769285
NCBI-ProteinID:
XP_023480283
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All DBs
Position
20:20480883..20491562
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AA seq
477 aa
AA seq
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MVQQTNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKADDPSWCKTPSGHIK
RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHM
ADYPDYKYRPRKKVKSGNANASSSAAAPKPGEKGDKVGGSGGGGHGGGGGGGSSSAGGGG
GGASGGGANSKPAQKKSCGSKAAGGAGGGLSKPHAKLILAGGGGGKAAAGAASSSFGAEQ
AGAAALLPLGAAAAAADHHALYKARTPGASASASTAAAASAALAAPGKHLAEKKVKRVYL
FGGLGASSSPVGGVGASADPSDPLGLYEDGGAGCSPDGPSLSGRSSAASSPAAGRSPADH
RSYASLRAASPAPSSAPSHASSSASSHSSSSSSSSGSSSSDDEFEDDLLDLNPSSNFESM
SLGSFSSSSALDRDLDFNFEPGSGSHFEFPDYCTPEVSEMISGDWLESSISNLVFTY
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcaaaccaacaacgccgagaacacggaagcgctgctggccggcgagagctcg
gactcgggcgccggcctcgagctgggcatcgcctcctcccccacgcccggctccaccgcc
tccacgggcggcaaggccgacgacccgagctggtgcaagacgccgagcgggcacatcaag
cggcccatgaacgccttcatggtgtggtcgcagatcgagcggcgcaagatcatggagcag
tcgcccgacatgcacaacgccgagatctccaagcggctgggcaaacgctggaagctgctc
aaagacagcgacaagatccctttcattcgggaggcggagcggctgcgcctcaagcacatg
gctgactaccccgactacaagtaccggcccaggaagaaggtgaagtccggcaacgccaac
gccagctcctcggccgccgcccccaagccgggggagaagggcgacaaggtcggtggcagc
ggcgggggcggccacgggggcggcggcggcggcgggagcagcagcgcggggggaggaggc
ggcggcgcgagcggcggcggcgccaactccaaaccggcgcagaaaaagagctgcggctcc
aaggcggcgggcggcgcgggcggcgggctcagcaaaccgcacgccaagctcatcctggcg
ggcggcggcggcgggaaagcggcggccggcgccgcctcctcgtccttcggggccgagcag
gcgggggccgccgccctgctgcccctgggcgccgccgccgccgccgccgaccaccacgcg
ctgtacaaggcgcggactcccggcgcctcggcctcggcctccaccgcggccgcggcctcc
gccgccctcgccgccccgggcaagcacctggccgagaagaaggtgaagcgcgtctacctg
ttcggcggcctgggcgcatcgtcgtcgcccgtcggcggtgtgggcgcgagcgctgacccc
agcgaccccctgggcttgtacgaggacggcggcgcgggctgctcgccggacgggccgagc
ctgagtggccgcagcagcgccgcctcgtcgccggccgccggccgctcgcccgccgatcac
cgcagctacgccagcctgcgcgccgcctcgcccgccccgtccagcgcgccctcacacgcg
tcctcctcggcctcgtcccactcgtcgtcgtcgtcctcctcctcgggctcctcgtcctcc
gatgatgagttcgaagacgacctgctcgacctgaaccccagctcaaactttgagagcatg
tccctgggcagtttcagctcatcgtcggcgctggaccgggacctggattttaacttcgag
cccggctccggctcgcacttcgagttcccggactactgcacgcccgaggtgagcgagatg
atctcgggagactggctcgagtccagcatctccaacctggtcttcacctactga
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