KEGG   Escherichia coli O6 K2 H1 CFT073 (UPEC): c1480
Entry
c1480             CDS       T00106                                 
Symbol
ycfD
Name
(GenBank) Hypothetical protein ycfD
  KO
K18850  50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
Organism
ecc  Escherichia coli O6:K2:H1 CFT073 (UPEC)
Brite
KEGG Orthology (KO) [BR:ecc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ecc03009]
    c1480 (ycfD)
Enzymes [BR:ecc01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.47  [50S ribosomal protein L16]-arginine 3-hydroxylase
     c1480 (ycfD)
Ribosome biogenesis [BR:ecc03009]
 Prokaryotic type
  ribosomal protein modification factors
   c1480 (ycfD)
SSDB
Motif
Pfam: JmjC_2 ROXA-like_wH Cupin_1 Cupin_2 AraC_binding Tup_N
Other DBs
NCBI-ProteinID: AAN79949
UniProt: A0A0H2V8Q4
LinkDB
Position
complement(1376560..1377690)
AA seq 376 aa
MLNMEYQLTLNWPDFLERHWQKRPVVLKRGFNNFIDPISPDELAGLAMESEVDSRLVSHQ
DGKWQVSHGPFESYDHLGETNWSLLVQAVNHWHEPTAALMRPFRELPDWRIDDLMISFSV
PGGGVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHCPHPDLLQVDPFEAIIDEELEPGD
ILYIPPGFPHEGYALENAMNYSVGFRAPNTRELISGFADYVLQRELGGNYYSDPDVPPRA
HPADVLPQEMDKLREMMLELINQPEHFKQWFGEFISQSRHELDIAPPEPPYQPDEIYDAL
KQGDVLVRLGGLRVLRIGDDVYANGEKIDSPHRPALDALASNIALTAENFGDALEDPSFL
AMLAALVNSGYWFFEG
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgcttaacatggaataccaactcactcttaactggcccgattttcttgaacgtcactgg
cagaaacgcccggtggtgttaaaacgcggctttaataattttattgacccaatctctcca
gacgagttggcgggtctggcgatggaaagcgaagtcgacagtcgactggtcagtcatcag
gatggcaaatggcaggtcagccacggtccattcgaaagctacgatcatctcggagaaact
aactggtcattgttagtgcaagcagtgaaccactggcatgagccgaccgctgcgctaatg
cgaccgttccgtgaactaccggactggcgtattgatgatctgatgatctctttttctgta
ccgggcggcggcgtcggcccgcatctcgatcagtacgacgtgtttatcattcagggtacc
ggtcgtcgtcgctggcgagtgggtgaaaagctgcaaatgaaacagcactgcccgcacccg
gatctgttacaggtcgatccgttcgaagccatcatcgatgaagagctggagcctggcgat
attctttatattccgccaggattcccgcatgaaggctacgcgctggaaaatgcgatgaac
tattccgtgggttttcgcgcgccgaatacgcgggaactgattagcggatttgccgattat
gtgctgcaacgtgaactgggcggcaactactacagcgatcctgatgttccacctcgcgct
catcctgcggacgttctgccgcaagagatggataaactgcgtgagatgatgctcgaattg
atcaaccagccggaacactttaagcaatggtttggcgagtttatatcccagtcacgtcat
gaactggatatcgcgccgccagagccgccttatcagccggatgaaatctacgatgcgctg
aaacaaggtgatgtgctggtgcgcctggggggtctgcgcgtattgcgcattggcgacgac
gtgtatgccaatggtgagaaaatcgattccccgcaccgtccggcactggatgcactcgcc
agcaacattgcgctgaccgcggagaattttggcgatgcgctggaagatccgtcattcctc
gcgatgctcgcggcgctggtcaatagcggatactggttcttcgaagggtaa

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