Escherichia coli K-12 W3110: JW2023
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Entry
JW2023 CDS
T00068
Symbol
rfbC
Name
(GenBank) dTDP-4-deoxyrhamnose-3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ecj
Escherichia coli K-12 W3110
Pathway
ecj00521
Streptomycin biosynthesis
ecj00523
Polyketide sugar unit biosynthesis
ecj00541
O-Antigen nucleotide sugar biosynthesis
ecj01100
Metabolic pathways
ecj01110
Biosynthesis of secondary metabolites
ecj01250
Biosynthesis of nucleotide sugars
Module
ecj_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
JW2023 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JW2023 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JW2023 (rfbC)
Enzymes [BR:
ecj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
JW2023 (rfbC)
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Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
IBD
bPH_4
Motif
Other DBs
NCBI-ProteinID:
BAA15880
UniProt:
P37745
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All DBs
Position
complement(2111718..2112275)
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AA seq
185 aa
AA seq
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MNVIRTEIEDVLILEPRVFGDDRGFFYESFNQSAFEHILGYPVSFVQDNHSRSSKNVLRG
LHFQRGEYAQDKLVRCTHGAVFDVAVDIRPNSVSFGKWVGVLLSADNKQQLWIPKGFAHG
FLVLSDIAEFQYKTTNYYHPESDCGICWNDERIAIDWPQTSGLILSPKDERLFTLDELIR
LKLIA
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgattagaactgaaattgaagatgtgctaattctggagccaagagtatttggt
gatgatagaggtttcttttatgagagctttaatcaatcagcatttgaacatattctaggc
tatccggtcagctttgttcaagacaatcactcacgttcatcaaaaaatgtactcagaggc
cttcactttcaacgcggcgagtacgcacaagataaacttgtacgctgcactcatggagca
gtttttgatgttgctgttgatattcgacccaattcggtatcctttggtaaatgggttggt
gttctgctttcagctgataataagcagcagttgtggataccaaaagggtttgctcatggc
tttttggttctgtctgatatcgctgaatttcaatataaaactacaaactattatcatcct
gaaagcgattgtggaatatgttggaatgatgaacgcattgcaattgattggccccaaaca
tcagggttaatcctttcgccaaaagatgaaaggctctttacgttagatgagcttatcaga
ttaaaattaattgcatga
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