Escherichia coli K-12 W3110: JW3538
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Entry
JW3538 CDS
T00068
Symbol
xylF
Name
(GenBank) D-xylose transporter subunit
KO
K10543
D-xylose transport system substrate-binding protein
Organism
ecj
Escherichia coli K-12 W3110
Pathway
ecj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JW3538 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecj02000
]
JW3538 (xylF)
Transporters [BR:
ecj02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
JW3538 (xylF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Phage_sheath_1C
Motif
Other DBs
NCBI-ProteinID:
BAE77727
UniProt:
P37387
Structure
PDB
LinkDB
All DBs
Position
complement(3908292..3909284)
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AA seq
330 aa
AA seq
DB search
MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV
QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD
IDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK
IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVA
ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDV
PSRLLTPIDVNKNNIKDTVIKDGFHKESEL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaagaacattctactcaccctttgcacctcactcctgcttaccaacgttgct
gcacacgccaaagaagtcaaaataggtatggcgattgatgatctccgtcttgaacgctgg
caaaaagatcgagatatctttgtgaaaaaggcagaatctctcggcgcgaaagtatttgta
cagtctgcaaatggcaatgaagaaacacaaatgtcgcagattgaaaacatgataaaccgg
ggtgtcgatgttcttgtcattattccgtataacggtcaggtattaagtaacgttgtaaaa
gaagccaaacaagaaggcattaaagtattagcttacgaccgtatgattaacgatgcggat
atcgatttttatatttctttcgataacgaaaaagtcggtgaactgcaggcaaaagccctg
gtcgatattgttccgcaaggtaattacttcctgatgggcggctcgccggtagataacaac
gccaagctgttccgcgccggacaaatgaaagtgttaaaaccttacgttgattccggaaaa
attaaagtcgttggtgaccaatgggttgatggctggttaccggaaaacgcattgaaaatt
atggaaaacgcgctaaccgccaataataacaaaattgatgctgtagttgcctcaaacgat
gccaccgcaggtggggcaattcaggcattaagcgcgcaaggtttatcagggaaagtagca
atctccggccaggatgcggatctcgcaggtattaaacgtattgctgccggtacgcaaact
atgacggtgtataaacctattacgttgttggcaaatactgccgcagaaattgccgttgag
ttgggcaatggtcaggaaccaaaagcagataccacactgaataatggcctgaaagatgtc
ccctcccgcctcctgacaccgatcgatgtgaataaaaacaacatcaaagatacggtaatt
aaagacggattccacaaagagagcgagctgtaa
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integrated database retrieval system
