Escherichia coli 55989 (EAEC): EC55989_4557
Help
Entry
EC55989_4557 CDS
T00826
Symbol
soxR
Name
(GenBank) DNA-binding transcriptional dual regulator, Fe-S center for redox-sensing
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
eck
Escherichia coli 55989 (EAEC)
Brite
KEGG Orthology (KO) [BR:
eck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eck03000
]
EC55989_4557 (soxR)
Transcription factors [BR:
eck03000
]
Prokaryotic type
Helix-turn-helix
MerR family
EC55989_4557 (soxR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR
MerR_1
HTH_17
HTH_3
TPP_enzyme_M
DUF2670
NinG
Motif
Other DBs
NCBI-ProteinID:
CAV01365
UniProt:
B7LB12
LinkDB
All DBs
Position
4669355..4669819
Genome browser
AA seq
154 aa
AA seq
DB search
MEKKLPRIKALLTPGEVAKRSGVAVSALHFYESKGLITSIRNSGNQRRYKRDVLRYVAII
KIAQRIGIPLATIGEAFGVLPEGHTLSAKEWKQLSSQWREELDRRIHTLVALRDELDGCI
GCGCLSRSDCPLRNPGDRLGEEGTGARLLEDEQN
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaaattaccccgcattaaagcgctgctaacccccggcgaagtggcgaaacgc
agcggtgtggcggtatcggcgctgcatttctatgaaagtaaagggttgattaccagtatc
cgtaacagcggcaatcagcggcgatataaacgtgatgtgttgcgatatgttgcaattatc
aaaattgctcagcgtattggcattccgctggcgaccattggtgaagcgtttggcgtgttg
cccgaagggcatacgttaagtgcgaaagagtggaaacagctttcgtcccaatggcgagaa
gagttggatcggcgcattcataccttagtggcgctgcgtgacgaactggacggatgtatt
ggttgtggctgcctttcgcgcagtgattgcccgttgcgtaacccgggcgaccgcttagga
gaagaaggtaccggcgcacgcttgctggaagatgaacaaaactaa
DBGET
integrated database retrieval system
