Escherichia coli ATCC 8739: EcolC_0817
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Entry
EcolC_0817 CDS
T00697
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ecl
Escherichia coli ATCC 8739
Pathway
ecl03410
Base excision repair
ecl03430
Mismatch repair
ecl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EcolC_0817
03430 Mismatch repair
EcolC_0817
03440 Homologous recombination
EcolC_0817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecl03400
]
EcolC_0817
DNA repair and recombination proteins [BR:
ecl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EcolC_0817
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EcolC_0817
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EcolC_0817
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
PEP-utilizers
Motif
Other DBs
NCBI-ProteinID:
ACA76489
LinkDB
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Position
874638..876371
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AA seq
577 aa
AA seq
DB search
MKQQIQLRRREVDETADLPAELPPLLRRLYASRGVRSAQELERSVKGMLPWQQLSGVEKA
VEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRSLGCSNIDYLVPNRFEDGYGLSPE
VVDQAHARGAQLIVTVDNGISSHAGVEHARSLGIPVIVTDHHLPGDTLPAAEAIINPNLR
DCNFPSKSLAGVGVAFYLMLALRTFLRDQGWFDERNIAIPNLAELLDLVALGTVADVVPL
DANNRILTWQGMSRIRAGKCRPGIKALLEVANRDAQKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQIEALTLCEKLERSRDTLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP
GMMLKFGGHAMAAGLSLEEDKFKLFQQRFGELVTEWLDPSLLQGEVVSDGPLSPAEMTME
VAQLLRDAGPWGQMFPEPLFDGHFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTA
LWPDNGVREVQLAYKLDINEFRGNRSLQIIIDSIWPI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaacagatacaacttcgtcgccgtgaagtcgatgaaacggcagacttgcccgcg
gaattgcctcccttgctgcgccgtttatacgccagccggggagtacgcagtgcgcaagaa
ctggaacgcagtgttaaaggtatgctgccctggcagcaactgagcggcgtcgaaaaggcc
gttgagatcctttacaacgcttttcgcgaaggaacgcggattattgtggtcggtgatttc
gacgccgacggtgccaccagcacggctctaagcgtgctggcgatgcgctcgcttggttgc
agcaatatcgactacctggtaccaaaccgtttcgaagacggttacggcttaagcccggaa
gtggtcgatcaggcccatgcccgtggcgcgcagttaattgtcacggtggataacggtatt
tcctcccatgcgggagttgagcacgctcgctcgttgggcatcccggttattgttaccgat
caccatttgccgggcgacacattacccgcagcggaagcgatcattaaccctaacttgcgc
gactgtaatttcccgtcgaaatcactggcaggcgtgggtgtggcgttttatctgatgctg
gcgctgcgcacctttttgcgcgatcagggctggtttgatgagcgtaacatcgcaattcct
aacctggcagaactgctggatctggtcgcgctggggacagtggcggacgtcgtgccgctg
gacgctaataatcgcattctgacctggcaggggatgagtcgcatccgagccggaaagtgc
cgtccggggattaaagcgctgcttgaagtggcaaaccgtgatgcacaaaaactcgccgcc
agcgatttaggttttgcgctggggccacgtctcaatgctgccggacgactggacgatatg
tccgtcggtgtggcgctgttgttgtgcgacaacatcggcgaagcgcgcgtgctggcaaat
gaactcgatgcgctaaaccagacgcgaaaagagatcgaacaaggaatgcaaattgaagcc
ctgaccctgtgcgagaaactggagcgcagccgtgacacgctacccggcgggctggcaatg
tatcaccccgaatggcatcagggcgttgtcggtattctggcttcgcgcatcaaagagcgt
tttcaccgtccggttatcgcgtttgcgccagcaggtgacggtacgctgaaaggttccggt
cgctccattcaggggctgcatatgcgtgatgcgctggagcgattagacacactctaccct
ggcatgatgctgaagtttggcggtcatgcgatggcggcgggtttgtcgctggaagaggat
aaattcaaactctttcaacaacggtttggcgaactggttactgagtggctggacccttcg
ctattgcaaggcgaagtggtatcagacggtccgttaagcccggccgaaatgaccatggaa
gtggcgcagctgctgcgcgatgctggcccgtgggggcagatgttcccggagccgctgttt
gacggtcatttccgtctgctgcaacagcggctggtgggcgaacgtcatttgaaggtgatg
gtcgaaccggtcggcggcggtccactgctggatggtattgcttttaatgtcgataccgcc
ctctggccggataacggcgtgcgcgaagtgcaactggcttataagctcgatatcaacgag
tttcgcggcaaccgcagcctgcaaattatcatcgacagtatctggccaatttag
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