KEGG   Escherichia coli ATCC 8739: EcolC_4223
Entry
EcolC_4223        CDS       T00697                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
ecl  Escherichia coli ATCC 8739
Pathway
ecl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ecl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EcolC_4223
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecl03019]
    EcolC_4223
Enzymes [BR:ecl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     EcolC_4223
Messenger RNA biogenesis [BR:ecl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     EcolC_4223
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C CCDC138_C AAA_22
Other DBs
NCBI-ProteinID: ACA79820
UniProt: B1IWC0
LinkDB
Position
4664354..4665619
AA seq 421 aa
MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcatccgaaggtt
gtagaagcccttgaaaaaaaagggtttcataactgtacgcccattcaggcactggccctt
ccgctgacgctggcgggtcgtgacgtagccgggcaggcgcaaaccggtaccgggaaaacg
atggcgtttcttacgtcaacgtttcattatcttctctctcatcctgcgattgccgatcgc
aaggtgaatcaaccgcgtgccttaattatggcaccgacgcgtgaacttgccgtgcagatc
catgccgacgcagaaccgctggcggaagctactggcctgaagctgggtctggcttacggt
ggtgatggctacgacaaacagctgaaagtgctggaaagcggcgttgacattctgattggc
accacgggtcgtttaattgactatgccaagcagaaccatattaacctcggtgccattcag
gtagtggtactggacgaagccgatcgcatgtacgatctgggctttattaaagatatccgc
tggctgttccgccgtatgccgcctgcaaaccagcgcctcaacatgctgttctccgccacg
ctttcgtaccgggtacgtgaactggcgttcgagcagatgaacaatgccgaatatattgaa
gtggaaccggaacagaaaacgggccaccgtattaaagaagagcttttctacccttctaac
gaagaaaaaatgcgtttgctgcaaacgctgatcgaagaagagtggccagacagagcgatt
attttcgccaataccaaacaccgttgtgaagagatctggggccacctggcggcagatggt
catcgtgtcggtttgttgacaggcgatgtcgcgcagaaaaaacgtctgcgtattcttgat
gaatttacccgtggcgatctggatattctggttgccaccgacgttgccgcgcgtggtttg
catattccggcagtgacgcacgtctttaactacgatttacccgatgactgtgaagattac
gttcaccgtattggtcgtacaggtcgcgcaggcgcaagcggtcactctatcagcctggcg
tgtgaagagtatgcattgaatttgcctgctattgagacctatattggtcactcaattccg
gtaagcaaatacaatccggacgcattgatgaccgatctgccaaaaccgctgcgcctcacg
cgcccgcgcacaggcaatggtccgcgtcgtactggcgctccgcgtaatcgtcgtcgttca
ggttaa

DBGET integrated database retrieval system