Enterobacter hormaechei subsp. hoffmannii ECNIH3: ECNIH3_06670
Help
Entry
ECNIH3_06670 CDS
T03350
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ecla
Enterobacter hormaechei subsp. hoffmannii ECNIH3
Pathway
ecla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ecla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ECNIH3_06670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecla03400
]
ECNIH3_06670
DNA repair and recombination proteins [BR:
ecla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ECNIH3_06670
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ECNIH3_06670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
UB2H
AAA_30
SBDS_domain_II
Helicase_C_2
AAA_22
IF2_N
Motif
Other DBs
NCBI-ProteinID:
AIN21993
LinkDB
All DBs
Position
1406487..1408502
Genome browser
AA seq
671 aa
AA seq
DB search
MSKPFKLNSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTQGMIIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDMALRVELFDEEVERLSLFDPLTGHVESVIQR
FTIYPKTHYVTPRERIVQAMEEIKIELADRRKVLLANNKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEAPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGDDVVDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRARSAINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGITPQGLNKKVVDILALG
QNIAKTKAKGRGKARSVVEEDTVALTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQL
HQLRDLFIAAS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaaattgaattctgctttccgtccttccggggatcagcccgaggcc
attcgtcgcctggaagaggggctggaagacgggctggcgcaccagaccctgctgggggta
accggttcgggtaaaaccttcactattgccaacgtcattgccgatctccagcgtcctacg
atggttctcgcgccgaacaaaacgctggcggcgcagctgtatggtgagatgaaagagttc
ttcccggaaaacgcggtggagtatttcgtctcctactacgactactaccagccggaagcc
tacgttcccagctccgacacgtttatcgagaaagatgcctcggtgaacgaacatatcgag
cagatgcgtttgtcggcgaccaaggcgctgctggagcgtcgtgatgtggtggtggtggcc
tcggtgtcggcgatctacggcctgggcgatccggatctctatctcaagatgatgctgcac
ctgacgcaggggatgatcattgatcagcgggcgattttgcgccgtctggcggagctgcag
tacacccgtaacgatcaggcgttccagcgcgggaccttccgcgtacgtggtgaggttatt
gatatcttcccggcggaatcggacgacatggcgctgcgcgtggagctgttcgatgaagag
gttgaacgcctgtcgctgttcgacccgctgaccggtcatgtggagtcggtgatccagcgc
ttcaccatctacccgaaaacgcactacgtgacgccacgcgagcgtatcgtacaggcgatg
gaagagattaaaattgagctggcagaccgccgcaaggtgctgctggcgaacaacaagctg
ctggaagagcagcgcctgagccagcgtacccagttcgatctggagatgatgaacgagctg
ggctactgctccggcatcgaaaactactcgcgctacctctccggacgcgggccgggcgaa
gcgccgccgacgctgtttgactaccttccggcggacggcctgctggtgatcgacgaatcc
cacgttacgatcccccagatcggcgggatgtaccgcggtgaccgcgcgcgtaaagagacg
ctggtggagtacggattccgactgccgtcagcgctggacaaccgtccgatgaagtttgaa
gaatttgaggcgcttgctccgcagaccatctacgtatcggcgacgccgggcaactacgag
ctggagaaatccggtgatgacgtggtggaccaggttgtgcgtccgaccgggctgctggat
ccgattatcgaggtgcgtccggtggcgacgcaggtggacgatctgctctcggaaatacgt
gcccgctctgccatcaacgagcgcgtgcttgtgaccacgctcaccaaacgtatggcggag
gatttgacggagtatctggaagaacacggcgagaaggtgcggtatctgcactcggatatt
gataccgtggagcgtatggagatcatccgcgacctgcgcctgggcgagttcgacgtgctg
gtgggtatcaaccttctgcgagaaggtctggatatgccggaagtgtcgctggtggcgatt
ctggacgcggacaaagagggcttcctgcgttccgagcgctcgctgatccagaccattggc
cgtgccgcgcgtaacgtcaacgggaaggcgattctgtacggggataaaatcaccccgtcg
atggccaaagcgattggcgaaacggaacgtcgtcgcgagaagcagcagcgctataacgaa
gagcacggcatcacgccgcaggggctgaacaagaaagtggtggatatcctggcgctgggt
cagaacattgcgaagaccaaagcgaaagggcgcggcaaggcccgttcagtggtggaagag
gataccgtcgcgctgaccccgaaagcgttgcagcaaaagatccacgagctggaagggcag
atgatgcagcacgcgcagaatctggagttcgaagaggctgcgcaaatccgcgatcagctt
catcagctgcgggatctgtttattgcggcatcgtag
DBGET
integrated database retrieval system
