Enterobacter hormaechei subsp. xiangfangensis: LI66_06525
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Entry
LI66_06525 CDS
T03707
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
eclx
Enterobacter hormaechei subsp. xiangfangensis
Pathway
eclx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eclx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LI66_06525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eclx03400
]
LI66_06525
DNA repair and recombination proteins [BR:
eclx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LI66_06525
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LI66_06525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
UB2H
AAA_30
SBDS_domain_II
Helicase_C_2
AAA_22
IF2_N
Motif
Other DBs
NCBI-ProteinID:
AJB81027
LinkDB
All DBs
Position
1385706..1387721
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AA seq
671 aa
AA seq
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MSKPFKLNSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTQGMIIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDMALRVELFDEEVERLSLFDPLTGHVESVIQR
FTIYPKTHYVTPRERIVQAMEEIKIELADRRKVLLANNKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEAPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGDDVVDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRARSAINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGITPQGLNKKVVDILALG
QNIAKTKAKGRGKARSVVEEDTVALTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQL
HQLRDLFIAAS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgtttaaactgaattctgctttccgtccttccggggatcagcccgaggct
attcgtcgcctggaagaggggctggaggacgggctggcgcaccagactctgctgggggtt
accggttcgggcaaaaccttcaccattgccaacgtcattgccgatctccagcgtccgacg
atggtcctcgcgccgaacaaaacgctggcggcgcagctgtatggtgagatgaaagagttc
ttcccggaaaacgcggtggagtatttcgtctcctactacgactactaccagccggaagcc
tacgttcccagctccgacacgtttatcgagaaagatgcctcggtgaacgaacatatcgag
cagatgcgtttgtcggcgaccaaggcgctgctggagcgtcgtgatgtggtggtggtggcc
tcggtgtcggcgatctacggcctgggcgatccggatctctatctcaagatgatgctgcac
ctgacgcaggggatgatcatcgatcagcgggcgattttgcgccgtctggcggagttgcag
tacacccgtaacgatcaggcgttccagcgcgggaccttccgcgtgcgcggcgaggtgatt
gatatcttcccggcggaatcggacgacatggcgctgcgcgtggagctgttcgacgaagag
gttgaacgcctgtcgctgttcgatccgttgaccggtcacgtcgagtcggtgatccagcgc
ttcaccatctacccgaaaacgcactacgtgacgccacgcgagcgtatcgtgcaggcgatg
gaagagatcaaaattgagctggcggaccgccgcaaggtgctgctggcgaacaataagctg
ctggaagagcaacgcctgagccagcgtacccagttcgatctggagatgatgaacgagctg
ggctactgctccggcatcgaaaactactcgcgctacctctccgggcgcgggccgggcgaa
gcgccgccgacgctgtttgactaccttccggcggacggcctgctggtgatcgacgaatcc
cacgttacgatcccccagatcggcgggatgtaccgcggtgaccgcgcgcgtaaagagacg
ctggtggagtacgggttccgactgccgtcagcgctggacaaccgtccgatgaagtttgaa
gaatttgaggcgcttgctccgcagaccatctacgtatcggcgacgccgggcaactacgag
ctggaaaaatccggtgatgacgtggtggaccaggtggtgcgtccgaccgggctgctggat
ccgattatcgaggtgcgtccggtggcgacgcaggtggacgatctgctctcggaaatacgt
gcccgttccgccatcaacgagcgcgtgctggttaccacgctcaccaaacgtatggcggaa
gatttgacggagtatctggaagaacacggcgagaaggtgcggtatctgcactcggatatc
gataccgtggagcgtatggagatcatccgcgatctgcgtctgggcgagttcgacgtgctg
gtaggaattaaccttctgcgagaaggtctggatatgccggaggtgtcgctggtggcgatt
ctggacgcggacaaagagggcttcctgcgttccgagcgctcgctgatccagactattggc
cgcgccgcgcgtaacgtcaacgggaaggcgatcctgtacggggataaaatcaccccgtcg
atggccaaagcgattggcgaaacggaacgtcgtcgcgagaagcagcagcgctataacgaa
gagcacggcatcacgccgcaggggctgaacaagaaggtggtggatatcctggcgctgggt
cagaacattgcgaagaccaaagcgaaaggccgcggcaaggcccgttcagtggtggaagag
gataccgtcgcgctgacgccgaaagcgttgcagcagaagatccacgagctggaagggcag
atgatgcagcatgcgcagaacctggagttcgaagaggctgcgcaaatccgcgatcagctg
catcagctgcgggatctgtttattgcggcatcgtga
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integrated database retrieval system
