Escherichia coli SMS-3-5 (environmental): EcSMS35_3892
Help
Entry
EcSMS35_3892 CDS
T00672
Symbol
xylR
Name
(GenBank) xylose operon regulatory protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecm03000
]
EcSMS35_3892 (xylR)
Transcription factors [BR:
ecm03000
]
Prokaryotic type
Helix-turn-helix
LacI family
EcSMS35_3892 (xylR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
HTH_AraC
HTH_18
Peripla_BP_4
COMMD1_N
Motif
Other DBs
NCBI-ProteinID:
ACB18036
UniProt:
B1LJD1
LinkDB
All DBs
Position
3961137..3962315
Genome browser
AA seq
392 aa
AA seq
DB search
MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGV
IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN
RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT
LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR
QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK
GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC
GYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtttactaaacgtcaccgcatcacattactgttcaatgccaataaagcctatgaccgg
caggtagtagaaggcgtaggggaatatttacaggcgtcacaatcggaatgggatattttc
attgaagaagatttccgcgcccgcattgataaaatcaaggactggttaggagatggcgtc
attgccgacttcgacgacaaacaaatcgagcaagcgctggctgatgtcgacgtccccatt
gttggggttggtggttcgtatcaccttgccgaaagttacccacccgttcattacattgcc
accgataactatgcgctggttgaaagcgcatttttgcatttaaaagagaaaggcgttaac
cgctttgctttttatggtcttccggaatcaagcggcaaacgttgggccactgaacgcgaa
tatgcatttcgtcagcttgtcgccgaagaaaagtatcgcggagtggtttatcaggggtta
gaaaccgcgccagagaactggcaacacgcgcaaaatcggctggcagactggctacaaacg
ctgccaccgcaaaccgggattattgccgttactgacgcccgggcacggcatattctgcaa
gtatgtgaacatctacacattcccgtaccggaaaaattatgcgtgattggcatcgataac
gaagaactgacccgctatctgtcgcgtgtcgccctttcttcggtcgctcagggcgcacgg
caaatgggctatcaggcggcaaaactgttgcatcgattattagataaagaagaaatgccg
ctacagcggattttggtcccaccagttcgcgtcattgaacggcgctcaacagattaccgc
tcgctgaccgatcccgccgttattcaggccatgcattacattcgtaatcacgcctgtaaa
gggattaaagtggatcaggtactggatgcggtgggcatatcacgctccaatcttgagaag
cgttttaaagaagaggtgggtgaaaccatccatgcaatgattcatgccgagaagttggag
aaagcgcgcagtctgctgatttcaaccaccttgtcgatcaatgagatatcgcaaatgtgc
ggttatccatcgctgcaatatttctactctgtttttaaaaaagcatatgacacgacgcca
aaagagtatcgcgatgtaaatagcgaggtcatgttgtag
DBGET
integrated database retrieval system
