Eupeodes corollae: 129947538
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Entry
129947538 CDS
T09463
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ecoe
Eupeodes corollae
Pathway
ecoe03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
129947538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecoe03400
]
129947538
Enzymes [BR:
ecoe01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
129947538
DNA repair and recombination proteins [BR:
ecoe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
129947538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
BRCT_2
mRNA_cap_enzyme
BRCT
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
129947538
NCBI-ProteinID:
XP_055914106
EnsemblRapid:
ENSEEAG00000004154
LinkDB
All DBs
Position
2:72136169..72146840
Genome browser
AA seq
897 aa
AA seq
DB search
MEISKKINFSELCEKLEKIQSSPNIAQKEKKTKQVIASFLEFSKQFLKDNGNDCNSSIYC
LLRCLIPKSDNARDSYGIQIPTLGKIYMKILHLAPGGTDERLLLQQSHSNSPRSEHSDYA
DILYKVLKPRTTNTPSELTLFDVNAMLDTISSGNRKSIENTLTRLCETASALEQKWFIRL
LLKRMNLGISETRIFSMLHPKAKEFFTRCSDLKEVCLAIERGDELCLEKVIAPFNHIRPM
LCERLKTENLYDMLGNDTLYAETKMDGERFQMHMVDGQFKYYSRNGVDYTKSFGNNEHNG
NLTPLLVSSLEKHVKNIILDGEMMVWDKISACYRVKGENFDVKHLEVGTNLRPCFVVYDL
IYLNDKSYVEKPYAERVDKLKSCFKEETGVLELGKRTKLCTLQHFMDIFNEALDANEEGV
VIKMHRSQYKPGSRNGGWFKVKADYIKGLVDDMDMLIMGAYFNRTKSYINSYLVGVMQGD
ENNATLHCVGKVGSGLSLDERITLNSSLSAKWKKGFTPKTMIFGNLSPEVWIEPKDSVVL
KLKASELSPASSFATPYSLRFPRIQEIRRDKPWFECMTLKEYEDFYQGDHGVKKINKRDL
NDEDMTSAKKPRTSRTKTSTSTTVYSNNFDGNQITVESSIFEDFNFCILSCLRGCHSINN
LKELVIRNGGKIVENPSPTDYKCICIAGDINYRVKNLCETGLYNVVSCNWLVDTAEEKRM
QLKPRDMISTTAEMKEQFKMLFDDHGDSYTDHVDEDEMRSLLNALNSKNLPVLQENEMTS
LEEEIYEQNSPNFFRKFNAFFYNQAPKDTLSHAVSVAKLMFQWRGGGCPDISTLEGEKRI
KFVFADVNEINMKELEMWFLATFTKRLLKVEVVSIDWITKSDAEDRKLPIDDYVIKF
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggaaatttcaaaaaagattaatttttctgaactgtgtgaaaagcttgaaaagattcaa
tcaagcccgaacattgcccaaaaagaaaagaaaaccaaacaagtcatcgcttccttctta
gaatttagtaaacaattccttaaggataatggcaatgattgtaattcaagtatttattgt
ctgctgaggtgtcttatacctaaatcggataatgccagggacagctatggcattcaaatt
ccaacactggggaaaatttacatgaaaattcttcatctagctccaggaggcactgatgag
cgcctgttgcttcaacaaagtcacagtaacagcccacgttccgaacattcagactatgca
gatattttgtacaaggtccttaagccccgcacgacaaacacaccaagtgaattaactcta
tttgatgttaacgcaatgttagacacaatttcttcagggaatcgcaaaagcattgaaaac
accctaaccagactttgcgaaacagcatctgctcttgaacaaaaatggtttatccgtttg
cttctcaaacgaatgaatctagggatcagtgaaacaagaatcttttcaatgcttcatccc
aaagcgaaagagttttttacacgatgctcagatttgaaggaagtatgcttagccatagaa
cgtggtgatgagttatgcttagaaaaggttatagctccatttaatcacatccgaccaatg
ttatgtgaacgtttgaaaacagaaaatttgtacgatatgttaggcaatgacactttatat
gcagaaaccaaaatggatggtgaacgttttcaaatgcatatggtcgatggacagttcaaa
tattattctcgtaacggtgttgattataccaaaagctttggaaataacgaacacaatggt
aacttaacacctctgctggtttcctcgttggaaaaacatgtcaaaaatattatcttggat
ggcgagatgatggtctgggataaaatatcagcgtgctatcgtgtaaagggtgaaaacttt
gatgtaaagcatcttgaagtaggcacaaatctacgtccttgtttcgtagtgtatgatctg
atttatctgaatgataaaagctatgtcgaaaaaccatatgctgaacgagttgataagctg
aaatcctgttttaaagaagaaacaggtgtattggaattaggaaaaagaacaaaactttgt
acacttcagcattttatggacattttcaatgaagcattggatgcaaatgaagaaggagtc
gtcatcaaaatgcatcgatctcagtacaaacctggatctcgtaatggaggatggtttaaa
gtaaaagcagattacataaaaggtttggtagatgacatggatatgcttattatgggagca
tactttaatcgcaccaaatcttacatcaatagctacttagttggggttatgcaaggagat
gaaaacaatgcaacattgcattgcgttggaaaagtaggaagtggattatcgttggacgag
agaataactttgaactctagtctctctgcgaaatggaaaaaaggatttacacctaaaaca
atgatattcggaaatttaagcccagaagtatggattgaacctaaagattctgtggtacta
aagctaaaagcaagtgaactatcgccagcgtcttcatttgcaacaccgtactctttgaga
tttccacgaatacaagaaattagaagagacaaaccttggtttgaatgtatgacgctaaaa
gagtacgaggacttctatcagggcgatcatggagttaaaaaaattaacaagcgtgatcta
aacgatgaagacatgacatctgcaaagaaacccaggaccagtagaactaagacatcgact
tcaacaaccgtctattcgaataatttcgatggaaatcagatcacagtggagtcgtctatt
tttgaagattttaatttttgtattctgagctgcctgcgaggctgtcattcaattaacaat
cttaaagaattagttataagaaatggcggaaaaatcgtagaaaatccttcaccaacagat
tacaaatgcatctgcattgcaggtgacattaactatcgtgttaagaacctttgcgaaacc
ggtctttacaatgttgtttcctgtaattggttagttgataccgctgaagaaaagcgcatg
caattaaaacctagagacatgataagtacaacagctgaaatgaaagaacaatttaagatg
ctttttgacgatcatggggattcctacactgaccatgttgatgaagatgaaatgagaagt
cttttaaatgcattaaattccaaaaatttacctgtgctgcaagaaaatgagatgacatca
ctcgaggaggaaatatatgaacaaaactctccgaacttcttccgcaaattcaatgcgttt
ttctataaccaagctccaaaagataccctgtcacatgcggtttcagttgctaagttaatg
ttccaatggcgaggaggtggctgtccagatatctcaacgctggaaggggaaaagagaatt
aaatttgtgtttgctgatgtaaatgaaattaatatgaaagaacttgaaatgtggttccta
gcgacattcacaaaacggctgcttaaagttgaagttgtatccattgattggataactaaa
agtgatgccgaggacaggaaattgccaattgatgattatgtaataaaattctaa
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