KEGG   Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_0111
Entry
ECRM13516_0111    CDS       T03011                                 
Symbol
hofC
Name
(GenBank) Type IV fimbrial assembly protein PilC
  KO
K02505  protein transport protein HofC
Organism
ecoh  Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:ecoh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ecoh02044]
    ECRM13516_0111 (hofC)
Secretion system [BR:ecoh02044]
 Type II secretion system
  Type IVa pilus homolog protein
   ECRM13516_0111 (hofC)
SSDB
Motif
Pfam: T2SSF Peptidase_M90
Other DBs
NCBI-ProteinID: AHG12807
LinkDB
Position
complement(121600..122802)
AA seq 400 aa
MASKQLWRWHGITGDGNAQDGMLWAESRTLLLMALQQQMVTPLSLKRIAINSAQWRGDKS
AEVIHQLATLLKAGLTLSEGLALLAEQHPSKQWQALLQSLAHDLEQGIAFSNALLPWSEV
FPPLYQAMIRTGELTGKLDECCFELARQQKAQRQLTDKVKSALRYPIIILAMAIMVVVAM
LHFVLPEFAAIYKTFNTPLPALTQGIMTLADFSGEWGWLLVLFGFLLAIANKLLMRRPTW
LIVRQKLLLHIPIMGSLMRGQKLTQIFTILALTQSAGITFLQGVESVRETMRCPYWVQLL
TQIQHDISNGHPIWLALKNAGEFSPLCLQLVRTGEASGSLDLMLDNLAHHHRDNTMALAD
NLAALLEPALLIITGGIIGTLVVAMYLPIFHLGDAMSGMG
NT seq 1203 nt   +upstreamnt  +downstreamnt
atggcgagtaagcaactctggcgctggcatggcataaccggcgacggcaatgcgcaagat
gggatgctatgggcagagagccgtactttactgcttatggcactacagcaacagatggtt
accccactaagcctgaagcgaatcgccatcaattctgcgcagtggcgaggagataaaagc
gcggaagtcattcatcaactggcgacgctactcaaagccgggttaacgctttctgaaggg
ctggcactgctggcggaacagcatcccagtaagcaatggcaagcgttgctgcaatcgctg
gcgcacgatctcgaacagggcattgccttttccaatgccttattaccctggtcagaggta
tttccgccgctctatcaggcgatgatccgcacgggtgaactgaccggtaagctggatgaa
tgctgctttgaactggcgcgtcagcaaaaagcccagcgtcagttgaccgacaaagtgaaa
tcagcgttgcgttatcccatcatcattttagcgatggcaatcatggtggttgtggcaatg
ctgcattttgttctgccggagtttgccgctatatataagaccttcaacaccccactaccg
gcactaacgcaggggatcatgacgctggcagactttagtggcgaatggggctggctgctg
gtgttgttcggctttctgctggcgatagccaataagttgctgatgcgccgaccgacctgg
cttatcgtgcggcagaaattgctgttacacatcccgattatgggctcactgatgcgggga
caaaaactcacgcagatctttacgattctggcgctgacacaaagtgcaggcattactttt
ttacagggcgtagagagcgtcagagaaacaatgcgctgcccgtactgggtgcaacttctg
acacaaatccagcacgatatcagtaacggtcatcccatctggctggcgctaaaaaatgcc
ggtgagtttagcccgctctgtttgcaattagtgagaacgggagaggcctccggctcgctg
gatctcatgttagacaacctcgcccatcatcatcgggataacacaatggcgctggcggat
aacctagcagccttactggaaccggcgttgctgatcataacgggaggaattatcggtacg
ctggtggtggcgatgtatctgccaattttccatttaggcgatgcgatgagtgggatggga
taa

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