Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_0322
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Entry
ECRM13516_0322 CDS
T03011
Symbol
lacZ
Name
(GenBank) Beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh00052
Galactose metabolism
ecoh00511
Other glycan degradation
ecoh00600
Sphingolipid metabolism
ecoh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
ECRM13516_0322 (lacZ)
09103 Lipid metabolism
00600 Sphingolipid metabolism
ECRM13516_0322 (lacZ)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
ECRM13516_0322 (lacZ)
Enzymes [BR:
ecoh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
ECRM13516_0322 (lacZ)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2_N
Bgal_small_N
LacZ_4
Glyco_hydro_2
Motif
Other DBs
NCBI-ProteinID:
AHG13010
LinkDB
All DBs
Position
complement(343808..346882)
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AA seq
1024 aa
AA seq
DB search
MTMITDSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTNRPSQQLRSLNGEWQ
FVWFPAPEAVPESWLECDLPDADTVVVPSNWQMHGYDAPIYTNVTYPIAVNPPFVPAENP
TGCYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSAFLRA
GENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQISDFHVATRFNDDFSRAV
LEAEVQMYGELRDELRVTVSLWQGETQVASGTVPFGGEIIDERGGYADRVTLGLNVENPK
LWSAEIPNIYRAVVELHTADGTLIEAEACDVGFREVRIENGLLLLNGKPLLIRGVNRHEH
HPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETHG
MVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRWIKSVD
PSRPVQYEGGGADTSATDIICPMYARVDEDQLFPAVPKWSIKKWLSLPGELRPLILCEYA
HAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFGDTPNDR
QFCMNGLVFADRTPHPALTEAKHQQQFFQFRLSGQTIEVTSEYLFRHSDNELLHWTVALD
GKPLASGEVPLDVAPQGKQVIELPELPQPESAGQLWLTVHVVQPNATAWSEAGHISTWQQ
WRLAENLSVTLPSAPHAIPQLTTSETDFCIELDNKRWQFNRQSGFLSQMWIGDEKQLLTP
LRDQFTRAPLDNDIGVSEATRIDPNAWVERWKAAGHYQAEAALLQCTADTLADAVLITTA
HAWQHQGKTLFISRKTYWIDGSGQMAITVDVEVASDTPHPARIGLTCQLAQVAERVNWLG
LGPQENYPDRLTAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRGDFQFNI
SRYSQQQLMETSHRHLLHAEEGTWLNIDGFHMGIGGDDSWSPSVSAEFQLSAGRYHYQLL
WCQK
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgactatgattacggattcactggccgtcgtattacaacgtcgtgactgggaaaaccct
ggcgttacccaacttaatcgccttgcagcacatccccctttcgccagctggcgtaatagc
gaagaggcccgcaccaatcgcccttcccaacagttgcgcagcctgaatggtgagtggcaa
tttgtctggtttccggcaccagaagcggtgccggaaagctggctggagtgcgatcttcct
gacgccgatactgtcgtcgtcccctcaaactggcagatgcacggttacgacgcgcccatc
tacaccaacgtgacctatcctattgcggtcaatccgccgtttgttcccgcagaaaatccg
acaggttgttactcgctcacatttaatgttgatgaaagctggctacaggaaggccagacg
cgaattatttttgatggcgttaactcggcgtttcatctgtggtgcaacgggcgctgggtc
ggttacggccaggacagccgtttgccgtctgaatttgacctgagcgcatttttacgcgcc
ggagaaaaccgcctcgcggtgatggtgctgcgctggagtgacggcagttatctggaagat
caggatatgtggcggatgagcggcattttccgtgacgtctcgttgctgcacaaaccgacc
acacaaatcagcgatttccatgttgccactcgctttaatgatgattttagccgcgcggta
ctggaggcagaagttcagatgtacggcgagctgcgcgatgagctgcgggtgacggtttct
ttgtggcagggtgaaacgcaggtcgccagcggcaccgtgcctttcggcggtgaaattatc
gatgagcgtggcggttatgccgatcgcgtcacactaggtctgaacgtcgaaaacccgaaa
ctgtggagcgccgaaatcccgaatatctatcgtgcggtggttgaactgcacaccgccgac
ggcacgctgattgaagcagaagcctgcgatgtcggtttccgcgaggtacggattgaaaat
ggtctgctgctgctgaacggcaagccgttgctgattcgcggcgttaaccgtcacgagcat
catcctctgcatggtcaggtcatggatgagcagacgatggtgcaggatatcctgctgatg
aagcagaacaactttaacgccgtgcgctgttcgcattatccgaaccatccgctgtggtac
acgctgtgcgaccgctacggcctgtatgtggtggatgaagccaatattgaaacccacggc
atggtgccaatgaatcgtctgaccgatgatccgcgctggttaccggcgatgagcgaacgc
gtaacacgaatggtgcagcgcgatcgtaatcacccgagtgtgatcatctggtcgctgggg
aatgagtcaggccacggcgctaatcacgacgcactctatcgctggattaaatctgtcgat
ccttcccgcccggtacagtatgaaggcggcggagccgacacctccgcaaccgatattatt
tgcccgatgtacgcgcgcgtggatgaagaccagctcttcccggcggtgccgaaatggtcc
atcaaaaaatggctttcgctgcctggagaactgcgcccgctgatcctttgcgaatacgcc
cacgcgatgggtaacagtcttggcggcttcgctaaatactggcaggcgtttcgtcagtac
ccccgtttacagggcggcttcgtctgggactgggtggatcagtcgctgattaaatatgat
gaaaacggcaacccgtggtcggcttacggcggtgattttggcgatacgccgaacgatcgc
cagttctgtatgaacggtctggtctttgccgaccgcacgccgcatccggcgctgacggaa
gcaaaacaccagcagcagtttttccagttccgtttatccgggcaaaccatcgaagtgacc
agcgaatacctgttccgtcatagcgataacgagctcctgcactggacggtggcgctggat
ggtaagccgctggcgagtggtgaagtgcctctggatgtcgctccacaaggtaaacaggtg
attgaactgcctgaactaccgcagccggagagcgccggacaactctggctaacggttcac
gtagtgcaaccgaacgcaaccgcatggtcagaagccggacacatcagcacctggcagcag
tggcgtctggcggaaaacctcagcgtgacactcccctccgcgccccacgccatcccgcaa
ctgaccaccagcgaaacggatttttgcatcgagctggataataagcgttggcaatttaac
cgccagtcaggctttctttcacagatgtggattggcgatgaaaaacaactgctgaccccg
ctgcgcgatcagttcacccgcgcaccgctggataacgacattggcgtaagtgaagcgacc
cgtattgaccctaacgcctgggtcgaacgctggaaggcggcgggccattaccaggccgaa
gcggcgttgttgcagtgcacggcagatacacttgccgacgcggtgctgattacgaccgct
cacgcctggcagcatcaggggaaaaccttatttatcagccggaaaacctactggattgat
ggtagtggtcaaatggcgattaccgttgatgttgaagtagcgagcgatacaccgcatccg
gcgcggattggcctgacctgccagctggcgcaggtagcagagcgggtaaactggctcgga
ttagggccgcaagaaaactatcccgaccgccttactgcggcctgttttgaccgctgggat
ctgccattgtcagacatgtataccccgtacgtcttcccgagcgaaaacggtctgcgctgc
gggacgcgcgaattgaattatggcccacaccagtggcgcggcgacttccagttcaacatc
agccgctacagccaacaacaactgatggaaaccagccatcgccatctgctgcacgcggaa
gaaggcacatggctgaatatcgacggcttccatatggggattggtggcgacgactcctgg
agcccgtcagtgtcggcggaattccagcttagcgccggtcgctaccattaccagttgctc
tggtgtcaaaaataa
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