Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_0454
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Entry
ECRM13516_0454 CDS
T03011
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh03030
DNA replication
ecoh03430
Mismatch repair
ecoh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ECRM13516_0454 (dnaX)
03430 Mismatch repair
ECRM13516_0454 (dnaX)
03440 Homologous recombination
ECRM13516_0454 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecoh03032
]
ECRM13516_0454 (dnaX)
03400 DNA repair and recombination proteins [BR:
ecoh03400
]
ECRM13516_0454 (dnaX)
Enzymes [BR:
ecoh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ECRM13516_0454 (dnaX)
DNA replication proteins [BR:
ecoh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ECRM13516_0454 (dnaX)
DNA repair and recombination proteins [BR:
ecoh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ECRM13516_0454 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_4
AAA
AAA_22
AAA_5
DNA_pol3_delta
RuvB_N
AAA_18
AAA_14
AAA_2
AAA_16
ResIII
AAA_assoc_2
AAA_7
nSTAND3
PIF1
TsaE
Motif
Other DBs
NCBI-ProteinID:
AHG13142
LinkDB
All DBs
Position
481662..483524
Genome browser
AA seq
620 aa
AA seq
DB search
MLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIE
QGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTL
EEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRAL
QLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGER
VMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPT
DIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEPEVPRQSFAPVAPTAV
MTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVN
NAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEH
EKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHL
NNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNN
IQTLRRFFDAELDEESIRPI
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaccgcactggcgaacggcttgtcgttagggcgtattcatcatgcttatcttttt
tccggtacccgtggcgtcggaaaaacctctatcgcccgactgctggcgaaggggctaaac
tgcgaaaccggcattaccgcgacgccgtgcggcgtgtgcgataactgtcgtgaaatcgag
caggggcgctttgtcgatctgattgaaatcgacgctgcctcgcgcaccaaagttgaagac
actcgcgacctgctggataacgtccagtacgctccggcgcgtggtcgtttcaaagtttat
ctcatcgacgaagtgcatatgctgtcgcgtcacagctttaacgcactgttaaaaactctt
gaagagccgccggagcacgttaagtttctgctggcgacgaccgatccacagaaattgccg
gtgacgattttgtcgcgctgtttgcaatttcatctcaaggcgctggatgtcgagcaaatt
cgtcatcaacttgagcacatcctcaatgaagaacatatcgctcacgagccgcgggcgctg
caattgctggcgcgcgccgctgaaggcagcctgcgagatgccttaagtctgaccgaccag
gcgattgccagcggtgacggccaggtttcaacccaggcggtcagtgcgatgctgggtacg
cttgacgacgatcaggcgctgtcgctggttgaagcgatggtcgaggccaacggcgagcgc
gtaatggcgctgattaatgaagccgctgcccgtggtatcgagtgggaagcgttgctggtg
gaaatgctcggcctgttgcatcgtattgcgatggtacaactttcgcctgctgcacttggc
aacgacatggccgccatcgagctgcggatgcgtgaactggcgcgcaccataccgccgacg
gatattcagctttactatcagacgctgttgattggtcgcaaagaattaccgtatgcgccg
gaccgccgcatgggcgttgagatgacgctgctgcgcgcgctggcgttccatccgcgtatg
ccgctgcctgagccagaagtgccacgccagtcctttgcacccgtcgcgccaacggcagta
atgacgccaacccaggtgccgccgcaaccgcaatcagcgccgcagcaggcaccgactgta
ccgctcccggaaaccaccagccaggtgctggcggcgcgccagcagttgcagcgcgtgcag
ggagcaaccaaagcaaaaaagagtgaaccggcagccgctacccgcgcgcggccggtgaat
aacgctgcgctggaaagactggcttcggtcaccgatcgcgttcaggcgcgtccggtgcca
tcggcgctggaaaaagcgccagccaaaaaagaagcgtatcgctggaaggcgaccactccg
gtgatgcagcaaaaagaagtggtcgccacgccgaaggcgctgaaaaaagcgctggaacat
gaaaaaacgccggaactggcggcgaagctagcggcagaagccattgagcgcgacccgtgg
gcggcacaggtgagccaactttcgctaccaaaactggtcgaacaggtggcgttaaatgcc
tggaaagaggagagcgacaacgcagtatgtctgcatttgcgctcctctcagcggcatttg
aacaaccgcggtgcacagcaaaaactggctgaagcgttgagcatgttaaaaggttcaacg
gttgaactgactatcgttgaagatgataatcccgcggtgcgtacgccgctggagtggcgt
caggcgatatacgaagaaaaacttgcgcaggcgcgcgagtccattattgcggataataat
attcagaccctgcgtcggtttttcgatgcggagctggatgaagaaagtatccgccccatt
tga
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