Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_0512
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Entry
ECRM13516_0512 CDS
T03011
Symbol
ybbF
Name
(GenBank) UDP-2,3-diacylglucosamine hydrolase
KO
K03269
UDP-2,3-diacylglucosamine hydrolase [EC:
3.6.1.54
]
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh00540
Lipopolysaccharide biosynthesis
ecoh01100
Metabolic pathways
Module
ecoh_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
ECRM13516_0512 (ybbF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ecoh01005
]
ECRM13516_0512 (ybbF)
Enzymes [BR:
ecoh01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.54 UDP-2,3-diacylglucosamine diphosphatase
ECRM13516_0512 (ybbF)
Lipopolysaccharide biosynthesis proteins [BR:
ecoh01005
]
Lipid A
ECRM13516_0512 (ybbF)
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
AP5B1_C
Motif
Other DBs
NCBI-ProteinID:
AHG13200
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All DBs
Position
complement(565715..566437)
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AA seq
240 aa
AA seq
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MATLFIADLHLCVEEPAITAGFLRFLAGEARNADALYILGDLFEAWIGDDDPNPLHRQMA
AAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCT
DDAGYQAFRAKVHKPWLQTLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVV
SAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtggcgacactctttattgcagatcttcatctctgcgtggaagaaccggcgatcaccgcc
ggttttctgcgttttttagcgggggaagcccgcaatgccgacgcgctgtatattcttggc
gatctgtttgaagcgtggattggcgacgacgatcccaacccactccatcgccagatggcg
gcagcgatcaaagcggtgtccgattccggcgttccctgttatttcattcatggcaaccgt
gattttctgctcggcaaacgctttgcccgtgaaagcggcatgacgttattgccggaagaa
aaagtgctcgaactttatggtcgtcgggtgctgattatgcatggcgacacgctgtgcacc
gatgacgcgggttatcaggcttttcgcgccaaagtccacaaaccctggctgcaaacgcta
ttcctcgccctgccgttgtttgtgcgcaaacgcattgccgcgcgaatgcgcgcgaacagt
aaagaagccaacagcagtaaatcgctggcgatcatggacgttaaccaaaacgcggtggtc
agtgcgatggaaaaacatcaggtgcaatggctgattcacgggcatacccatcgcccggcg
gtacatgaacttatcgccaaccagcaacctgcttttcgcgtggtactgggtgcctggcat
acggaaggttcgatggtgaaagtcacggcggatgacgttgagctgattcattttccgttt
taa
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