Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_0945
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Entry
ECRM13516_0945 CDS
T03011
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecoh03009
]
ECRM13516_0945
Ribosome biogenesis [BR:
ecoh03009
]
Prokaryotic type
ribosomal protein modification factors
ECRM13516_0945
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Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
AHG13618
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Position
complement(986747..988507)
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AA seq
586 aa
AA seq
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MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNG
KGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEG
LLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVS
NGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAE
GFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLM
AIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGS
EWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQ
ALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAA
SAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAFWAK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaacatttatccccggcaaagatgccgcactggaagattccatcgctcgcttc
cagcaaaaactttcagacctcggctttcagattgaagaggcctcctggctgaatcccgtg
cctaacgtctggtctgtacatattcgcgacaaagagtgcgcactgtgttttaccaacggt
aaaggcgcaaccaagaaagcggcgctggcttctgcactcggtgaatatttcgagcgtctc
tcaaccaactacttttttgctgatttctggctgggcgaaaccatcgccaacggtccattt
gtgcattatcccaacgaaaaatggttcccactgaccgaaaatgacgatgtgccagaaggg
ctgctcgatgaccgtctgcgcgcattttacgatccggagaatgaattgaccggcagtatg
ctgattgacctacaatccggtaacgaagatcgtggtatttgcggtctgccgtttacgcgc
cagtccgacaatcagaccgtttatattccgatgaatatcattggtaacctgtacgtttct
aacggtatgtccgctggcaatacccgcaacgaagcacgcgttcaggggttgtccgaagtt
ttcgaacgctacgtgaaaaaccgcattattgctgaaagcatcagcttgccggaaatcccg
gcagacgtgctggcgcgttacccagcggtggttgaagcgatcgaaacactggaagcagaa
ggtttcccgatcttcgcatatgatggttcccttggcggccagtatccggtgatttgcgtg
gtactgtttaatcctgctaacggcacctgctttgcctctttcggtgcgcatcctgatttt
ggcgtagcactggaacgtaccgtgaccgagctgctgcaaggtcgtggcctgaaagatttg
gatgtgtttactccgccaaccttcgatgatgaagaagtcgctgaacataccaacctcgaa
acgcactttatcgattccagcggtttaatctcctgggacctgttcaagcaggatgccgat
tatccgtttgtggactggaatttctccggcaccacggaagaagagtttgctacgctgatg
gctatcttcaacaaagaagataaagaagtttatattgccgattacgagcatctgggcgtt
tatgcttgccgtattatcgtgcctggcatgtccgatatttatccggctgaagatctgtgg
ctcgcgaataacagtatgggcagccatttacgtgaaacgattctttcgctaccaggcagc
gagtgggaaaaagaagattacctgaacctcatcgagcaactggatgaagaaggttttgat
gactttacccgcgtgcgtgagctgttgggtctggcgaccgggtcggataacggttggtac
accctgcgtatcggtgaattaaaagccatgctggcgctggctggtggcgatctggaacag
gctctggtctggaccgaatggacgatggagtttaactcatcggtattcagcccggaacgc
gccaactattatcgctgcctgcaaacgttgttattactggcgcaggaagaagatcgccag
ccgctgcaatatctgaatgcgtttgttcgcatgtacggcgcagatgccgtggaagccgct
agtgcggcaatgagcggcgaagcggcgttttatggcttgcaaccagtagatagcgatctg
cacgcgtttgctgcacatcagtcgctgttgaaggcctacgaaaagctgcagcgcgccaaa
gcagcattctgggcaaaataa
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