Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_5014
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Entry
ECRM13516_5014 CDS
T03011
Symbol
lysS_2
Name
(GenBank) Lysyl-tRNA synthetase (class II)
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ECRM13516_5014 (lysS_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecoh01007
]
ECRM13516_5014 (lysS_2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecoh03016
]
ECRM13516_5014 (lysS_2)
Enzymes [BR:
ecoh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
ECRM13516_5014 (lysS_2)
Amino acid related enzymes [BR:
ecoh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
ECRM13516_5014 (lysS_2)
Transfer RNA biogenesis [BR:
ecoh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
ECRM13516_5014 (lysS_2)
Prokaryotic type
Other AARSs
ECRM13516_5014 (lysS_2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF2333
Motif
Other DBs
NCBI-ProteinID:
AHG17600
LinkDB
All DBs
Position
complement(4984623..4986140)
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AA seq
505 aa
AA seq
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MSEQETRGANEAIDFNDELRNRREKLAALRQQGVAFPNDFRRDHTSDQLHEEFDAKDNQE
LESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDLGD
IIGARGTLFKTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKS
RQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRT
LAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGI
TVEKSWGLGRIVTEIFDEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG
REIGNGFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGID
RMIMLFTNSHTIRDVILFPAMRPQK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacaagaaacacggggagccaatgaggctattgattttaacgatgaactgaga
aatcgccgcgaaaaactggcggcactacgtcagcaaggtgtggcgtttcccaatgatttt
cgccgcgaccatacctctgaccagttgcacgaagagtttgatgcgaaggataaccaggaa
ctggaatccttaaacattgaagtctcggttgctggccgaatgatgacccgtcgtatcatg
gggaaagcctcctttgtaacgttgcaggatgtcggtggccgtattcaactgtacgtcgca
cgagatagcctgccagaaggtgtttataacgatcagtttaaaaaatgggatctgggtgac
attatcggtgcccgcggtacgctgtttaagacgcaaacgggcgagctttccattcactgt
actgagttgcgcctgctgacaaaagcactacgtcctttaccagataaattccatggtctg
caggatcaggaagtccgttatcgtcaacgttatctggacctcatcgctaacgataaatcc
cgtcaaacgtttgttgtccgttcaaaaattctggccgctatccgtcagttcatggtcgcg
cgcggctttatggaagtagaaaccccgatgatgcaggtaattccaggtggggcatctgct
cgcccgtttattacccatcataatgctctggatttagatatgtatctgcgtatcgcgccg
gagctgtatctgaaacgtctggttgtaggcggttttgaacgggtattcgaaatcaaccgt
aacttccgtaatgaaggtatttctgttcgccataatcctgagttcacaatgatggaactc
tacatggcgtatgcggattaccacgatttgattgaactgacagagtcactgttccgcacc
ctggcacaagaggttctgggtaccactaaagtcacttatggcgagcatgtgtttgatttc
ggcaaaccgtttgaaaaactcaccatgcgcgaagcaatcaaaaaatatcgtccagaaacc
gatatggccgacctggataattttgatgctgctaaagcattagctgaatctatcggaatt
acggtagagaaaagctgggggctgggacgtattgtcacggagatctttgatgaagtggca
gaagcacatctgattcagccaacctttattacggaatatccggcagaagtgtccccgctg
gcgcgccgtaatgatgttaacccggaaatcaccgaccgttttgaattcttcatcggtggt
cgtgaaatcggtaatggttttagcgaattaaacgacgcagaagatcaggctgaacgtttc
caggaacaggttaacgctaaagctgcaggtgacgacgaagccatgttctatgacgaagat
tacgtgactgcgctggaatatggtctgccgccaaccgctggtctgggtattggtatcgac
cgaatgattatgctgtttactaacagccatactattcgcgacgttattctcttcccggcg
atgcgcccacagaaataa
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