Escherichia coli O18 K1 PMV-1 (ExPEC): ECOPMV1_02916
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Entry
ECOPMV1_02916 CDS
T02847
Symbol
csiR
Name
(GenBank) Carbon starvation induced regulator
KO
K15735
GntR family transcriptional regulator, carbon starvation induced regulator
Organism
ecoi
Escherichia coli O18:K1 PMV-1 (ExPEC)
Brite
KEGG Orthology (KO) [BR:
ecoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoi03000
]
ECOPMV1_02916 (csiR)
Transcription factors [BR:
ecoi03000
]
Prokaryotic type
Helix-turn-helix
GntR family
ECOPMV1_02916 (csiR)
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Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
PGM1_C
HTH_41
Pox_A32
Motif
Other DBs
NCBI-ProteinID:
CDH66294
LinkDB
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Position
2993357..2994019
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AA seq
220 aa
AA seq
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MTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLREALSQLVAERLVTVVN
QKGYRVASMSEQELLDIFDARANMEAMLVSLAIARGGDEWEADVLAKAHLLSKLEACDAS
EKMLDEWDLRHQAFHTAIVAGCGSYYLLQMRERLFDLAARYRFIWLRRTVLSVEMLEDKH
DQHQTLTATVLARDTARASELMRQHLLTPIPIIQQAMAGN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaccattacctctctggatggctatcgctggctgaagaacgatattattcgcggcaat
tttcagccggatgaaaaattacggatgagtttgctgacatcgcgttatgcacttggcgtc
ggaccgttgcgggaggcgctttcgcaactggtggcagaacgactggtcacggtggtgaat
caaaaagggtatcgggtggcgtctatgtcagagcaggagctgctcgatattttcgacgcc
cgcgccaatatggaagcgatgctggtgagtctggcgattgcccgcggtggcgatgaatgg
gaggcagacgttcttgcgaaggcgcatctgctcagtaagcttgaggcctgtgacgccagt
gagaaaatgcttgatgagtgggatctgcgtcatcaggcgtttcatactgcaattgtggcg
ggctgtggttcttactatttgctgcaaatgcgtgaacggttgtttgatctggcagcgcgt
tatcgatttatctggctgcggcgaacagtgctttcggtggaaatgctggaagataaacac
gatcagcaccagaccctgactgcgacggtactggcgcgagataccgcgcgcgccagtgag
ttaatgcgccagcatttactgacgccaattcccattatccagcaggcgatggctggcaat
taa
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