Eikenella corrodens: SAMEA4412678_1295
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Entry
SAMEA4412678_1295 CDS
T05039
Symbol
priA
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ecor
Eikenella corrodens
Pathway
ecor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SAMEA4412678_1295 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecor03400
]
SAMEA4412678_1295 (priA)
Enzymes [BR:
ecor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMEA4412678_1295 (priA)
DNA repair and recombination proteins [BR:
ecor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SAMEA4412678_1295 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
PriA_CRR
Helicase_C
AAA_30
HypA
zinc-ribbons_6
zf-CHY
NOB1_Zn_bind
Trm112p
Motif
Other DBs
NCBI-ProteinID:
SNW08898
UniProt:
A0A8B4G405
LinkDB
All DBs
Position
1:complement(1316830..1319031)
Genome browser
AA seq
733 aa
AA seq
DB search
MPYCQVALNVPLDTLLTYRADRIPAPGVRVAVPFRDKTVAGIVWGACEEPEISPDKIRPL
AQVFEHEPLLPAAWRELIEFTARYYHHPIGQTAFTALPAGLREAKPCPLPQPETYFSLTD
LGRQQSSPPPHHRRKAALWQALLESTVSQSTARTIAPQAAAQLADWQAQGWLTAETSTLP
THMPIPPSPVPLNPEQQAAADAVAQAQGFAPFLLYGITGSGKTETYFEAMAAALSAGKQV
LFLLPEISLTPQLIARLQQRFADVPTAVLHSQTAAGERTQGYLKAMCGRVRLVVGTRLAV
FTPLPDLGLIVVDEEHDSSFKQDSELRYHARDLAVWRARQAGCPIVLGSATPALESWHKA
QSGGYRLLSLPQRARAAARLPEIHLIDIRREPLDQGFSPAAFKLLQQNHAAGGMSMVYLN
RRGFAPALFCGDCGHTFGCPHCSAKLVLHQLAHQLRCHHCGLAAPIPKKCPDCGNQDLTA
VGIGTQRVEEALRAQLPGAKIERVDRDSVARKGDWQRLYQRIAANGVDILVGTQMLAKGH
DFARLNLVLVLNADGSLYSADFRAPERLFAELMQVAGRAGRAELPGRVFIQTRLPEHRVY
QTLLRQNYADFAAGELAERESFDMPPFAHTATIRADAANMADALEMLRLAAEWVAQQRLP
ESAENEAKEVLCLGPVPMLLAKLAGRERAQVFLESPNRKALHRQVSLWQQALATLARQFA
AARWSVDIDPLEM
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtgccctactgccaagttgccctcaatgttcctctcgacacgctgcttacctaccgtgcc
gaccgtattcccgcgcccggagtgcgcgtggccgtgccgtttcgcgacaaaaccgtggcc
ggtatcgtgtggggcgcgtgcgaagaaccagaaatcagcccggacaaaatccgcccgctc
gcgcaagtgtttgaacacgaaccgctgctgcccgcagcctggcgcgaactgattgaattt
actgcccgttattatcaccaccccatcggccaaaccgccttcaccgccctgccagccggc
ctgcgcgaagccaagccctgcccgttgccgcagccggaaacctatttttcgctcaccgat
ttggggcgacaacagtcatccccgccgccgcaccatcgccgcaaggccgcgctgtggcag
gcgctgctggagagcacggtaagccaaagcaccgcccgcaccatcgcgccgcaggccgcc
gcccagctggccgattggcaagcgcaaggctggctgacagccgaaactagcactctgccc
acccacatgccgattccgccctcgcccgtgccgctcaaccccgagcagcaggccgcggcc
gatgcggtggcacaggcgcagggttttgcccccttcctactgtatggcatcactggcagt
ggcaaaaccgaaacctatttcgaagccatggctgccgcgctctcggcgggcaaacaggtg
ttgttcctgctgcctgaaatcagtctcacgccgcagcttatcgcccgtttgcaacagcgc
tttgccgatgtgccgactgccgtgttgcacagccaaaccgccgccggcgaacgtacccaa
ggctacctgaaagccatgtgcggccgggtgcgactggtggtggggacccggttggcagtg
ttcacgccgctgccggatttagggctgattgtggtggatgaagaacacgattcctcgttc
aagcaagacagcgagctgcgctaccacgcccgcgatttggccgtgtggcgcgcacgccaa
gccggctgcccgattgtgctaggcagcgccacgcccgcgctggaaagctggcacaaggcg
caaagcggcggctaccgcctgctcagcctgccgcaacgcgcccgcgcggccgcccgcctg
cccgaaatccacctaatcgacattcgccgcgagcccttggaccaaggcttcagcccggct
gctttcaagctgttgcagcaaaatcacgctgccggcggcatgagcatggtgtacctcaat
cggcgtggcttcgcccctgccctattctgcggcgactgcggccacaccttcggctgcccg
cactgctccgccaaactagtgctgcaccagcttgcgcaccagttgcgttgccaccattgc
ggcctggcggcgccgattccgaaaaaatgccccgactgcggcaaccaagacctcaccgcc
gtgggcatcggcacgcagcgggtggaagaagccctgcgcgcgcaactgcccggggccaaa
atcgagcgcgtggaccgcgacagcgtcgcccgcaaaggcgactggcaacggctctaccaa
cgcatcgccgcaaacggcgtggatattttggtgggcacgcagatgctggccaaaggccac
gatttcgcccgcctgaatttggtgctggtactcaacgccgacggcagcctctacagcgct
gatttccgcgcccccgagcggctgtttgccgaactgatgcaggtggccggccgcgccggg
cgtgccgaactgcccggccgcgtgttcatccaaacccgcctgccggagcatcgcgtgtat
caaacgctgctgcggcaaaactatgccgacttcgccgccggcgagctggccgagcgcgaa
agtttcgatatgccgcccttcgcccacaccgccaccatccgcgccgatgccgccaatatg
gccgatgcgttggaaatgttgcgcctagccgccgaatgggtggcgcaacaaaggctacct
gaaagtgcggaaaacgaagccaaagaagtgctctgcctcggcccggtacccatgctgctg
gccaaactcgccggccgcgaacgcgcccaggtgtttctggaaagcccaaaccgcaaagcg
ctgcaccgccaagtctccctatggcagcaagccctcgccacgctggcacggcagtttgcc
gcggccagatggtcggtggatatcgatcccttggagatgtga
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