Escherichia coli O25b K100 H4-ST131 EC958 (UPEC): EC958_4121
Help
Entry
EC958_4121 CDS
T04373
Name
(GenBank) putative autotransporter
KO
K12687
antigen 43
Organism
ecos
Escherichia coli O25b:K100:H4-ST131 EC958 (UPEC)
Pathway
ecos02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecos00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
EC958_4121
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecos02000
]
EC958_4121
02044 Secretion system [BR:
ecos02044
]
EC958_4121
Transporters [BR:
ecos02000
]
Other transporters
Pores ion channels [TC:
1
]
EC958_4121
Secretion system [BR:
ecos02044
]
Type V secretion system
Autotransporter-1 (AT-1) family
EC958_4121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIDA
Autotransporter
AC_1
ESPR
Motif
Other DBs
NCBI-ProteinID:
CDN84481
UniProt:
A0AA36L1Y3
LinkDB
All DBs
Position
4189933..4192779
Genome browser
AA seq
948 aa
AA seq
DB search
MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADKVVQAG
ETVNDGTLTNHDNQIVLGTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGL
QRVNAGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEGGIATGTVINEKGWQAIKSG
AMATDTVVNTGAEGGPDAENGDTGQFVRGNAVRTTINENGRQIVAAEGTANTTVVYAGGD
QTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIVKEGGLADFTTVNQKGKLQVNAD
GTATNVTLKQGGALVTSTAATVTGSNRLGNFTVENGNADGVVLESGGRLDVLEGHSARKT
LVDDGGTLAVSAGGKATDVTMTSGSALIADSGATVEGTNASGKFSIDGTSGQASGLLLEN
GGSFTVNAGGLASNTTVGHRGTLMLAAGGSLSGRTQLSKGASMVLNGDVVSTGDIVNAGE
IRFDNQTTPDAALSRAVAKGDSPVTFHKLTTSNLTGQGGTINMRVRLDGSNASDQLVING
GQATGKTWLAFTNVGNSNLGVATSGQGIRVVDAQNGATTEEGAFALSRPLQAGAFNYTLN
RDSDEDWYLRSENAYRAEVPLYASMLTQAMDYDRILADSRSHQTGVNGENNSVRLSIQGG
HLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSLTTGVYGAAGHSSVDVKDDD
GSRAGTVRDDAGSLGGYLNLVHTSSGLWTDIVAQGTRHSMKASSDNNDFRARGWGWLGSL
ETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHGSAQHVRAGFRLGSHNDMN
FGKGTSSRDTLRDSAKHSVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSRN
GTSLDLQAGLEARVRENITLGVQAGYAHSVSGSSAEGYNGQATLNVTF
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgacatctgaacaccagctacaggctggtatggaatcacattacgggcaccctg
gtggtggcctccgaactggcccgctcacggggaaaacgcgctggtgtggcggttgcgctg
tctcttgctgctgtcacatcagtcccggcactggctgctgacaaggttgtacaggcggga
gaaaccgtgaacgacggaacactgacaaatcatgacaaccagattgtcctcggtacggcc
aacggaatgaccatcagtaccggtctggagtatgggccggataacgaggccaataccggc
ggacaatggatacaaaatggcggtatcgccaacaacactactgtcaccggtggtggtctt
cagagagtgaatgccggaggaagcgtttcagacacggttatcagtgccggaggcggacag
agccttcaggggcaggcagtgaacaccactctgaacggcggtgagcagtgggtacatgaa
ggcgggattgcaacgggtaccgtcattaatgagaagggctggcaggccatcaaatccggc
gcaatggcaaccgacacggttgtgaataccggcgcggaagggggaccggatgcagaaaat
ggtgataccgggcagtttgttcgcggaaatgccgtacgtaccactatcaatgaaaatggt
cgtcagattgtggctgctgaaggaacagcaaataccactgtggtttatgccggcggcgac
cagacggtacacgggcatgcgctggataccacactgaatggcggttaccagtatgtgcac
aacggaggcacagcctctgacacggttgtaaacagtgacggctggcagattgtcaaggaa
ggtggtctggcggatttcaccaccgttaaccagaaaggcaaactgcaggtgaacgccgat
ggtacagccacgaatgtcaccctgaagcagggaggcgcactggtcaccagtacggcggca
accgtcaccggcagcaaccgtctgggcaatttcactgtggaaaacggtaatgctgacggt
gttgttctggagtccggtggtcgcctggatgtactggagggccattcagcccggaaaaca
ctggtggatgacggcggaaccctggcagtgtctgccggtggtaaggcaacagatgtcacc
atgacatccggtagtgccctgattgcagacagtggtgccactgttgaggggaccaatgcc
agcggtaagttcagtattgatggcacatccggtcaggccagcggactgctgctggaaaat
ggcggcagctttacggttaatgccggaggactggccagcaacaccactgtcggacatcgt
ggaacactgatgctggctgccgggggaagtctgagtggcagaacacagctcagtaaaggt
gccagcatggtactgaatggcgatgtggtcagtaccggcgatattgttaacgcaggggag
attcgctttgataatcagacgacaccggatgccgcgctgagccgtgctgttgcaaaaggc
gactccccggtaacgttccataaactgaccaccagtaacctcaccggtcagggtggcacc
atcaatatgcgtgttcgccttgatggcagtaatgcctctgaccagctggtgattaatggt
ggtcaggcaaccggtaaaacctggcttgcgtttacaaatgtcggaaacagtaacctcggg
gtggcaacctccggacagggtatccgggttgtggatgcacagaatggtgccaccacagaa
gaaggtgcgtttgccctgagtcgcccgcttcaggctggcgcctttaactacaccctgaac
cgtgacagcgatgaagactggtacctgcgcagtgaaaatgcttatcgtgctgaagtcccc
ctgtatgcctccatgctgacacaggcaatggactatgaccggattctggcagactcccgc
agccatcagaccggtgtaaacggtgaaaataacagcgtccgtctcagcattcagggcggt
catctcggtcacgataacaacggcggtattgcccgtggggccacgccggaaagcagcggc
agctatggcttcgtccgtctggagggtgacctgctcagaacagaggttgccggtatgtca
ctgacgacaggagtgtatggtgctgcaggccattcttccgttgatgttaaggatgatgac
ggctcccgtgccggcacggtccgggatgatgccggcagtctgggcggatacctgaatctg
gtacacacgtcctccggcctgtggactgacattgtggcacagggaacccgccacagcatg
aaagcgtcatcggacaataacgacttccgcgcccggggctggggctggctgggctcactg
gaaaccggtctgcccttcagtatcactgacaatctgatgctggagccacaactgcagtac
acctggcagggactctccctggatgacggccaggataacgccggttatgtgaagttcggg
catggcagtgcacaacatgtgcgtgccggtttccgtctgggcagccacaacgatatgaac
tttggtaaaggcacctcatcccgtgacaccctgcgcgacagtgcaaaacacagtgtgcgt
gaactgccggtgaactggtgggtacagccttctgttatccgcaccttcagctcccgggga
gacatgagcatgggtacagccgcagccggcagtaacatgacgttctcaccgtcccggaat
ggcacgtcactggacctgcaggccggactggaagcccgtgtccgggaaaatatcaccctg
ggcgttcaggccggttatgcccacagcgtcagcggcagcagcgctgaaggttataacggt
caggccacgctgaatgtgactttctga
DBGET
integrated database retrieval system
