Escherichia coli O81 ED1a (commensal): ECED1_0190
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Entry
ECED1_0190 CDS
T00827
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Pathway
ecq03030
DNA replication
ecq03430
Mismatch repair
ecq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ECED1_0190 (dnaE)
03430 Mismatch repair
ECED1_0190 (dnaE)
03440 Homologous recombination
ECED1_0190 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecq03032
]
ECED1_0190 (dnaE)
03400 DNA repair and recombination proteins [BR:
ecq03400
]
ECED1_0190 (dnaE)
Enzymes [BR:
ecq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ECED1_0190 (dnaE)
DNA replication proteins [BR:
ecq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ECED1_0190 (dnaE)
DNA repair and recombination proteins [BR:
ecq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ECED1_0190 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CAR06409
UniProt:
B7MP44
LinkDB
All DBs
Position
209901..213383
Genome browser
AA seq
1160 aa
AA seq
DB search
MSEPRFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGA
GIKPIVGADFNVQCDLLGDELTHLTVLAANNTGYQNLTLLISKAYQRGYGTAGPIIDRDW
LIELNEGLILLSGGRMGDVGRSLLRGNSALVDECVAFYEEHFPDRYFLELIRTGRPDEES
YLHAAVELAEARGLPVVATNDVRFIDSSDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSEEEMCELFADIPEALANTVEIAKRCNVTVRLGEYFLPQFPTGDMSTEDYLVKRAKEGL
EERLAFLFPDEEERVKRRPEYDERLDTELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQ
FDKSDVEYAGLVKFDFLGLRTLTIINWALEMINKRRAKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSVFAEGAEKNGINAELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNKGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLY
LTGHPINQYLKEIERYVGGVRLKDMHPTERGKVITAAGLVVAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccacgtttcgtacacctgcgggtgcacagcgactactcgatgatcgatggc
ctggccaaaaccgcaccgctggtaaaaaaggcggcagcgttgggtatgccagcactggcg
atcaccgatttcaccaacctttgcggtctggtgaagttctacggagcgggacatggcgca
gggattaagcccatcgtcggggcggattttaacgtccagtgcgacctgctgggtgatgag
ttaactcacctgacggtgctggcggcgaacaataccggctatcagaatctgacgttgctg
atctcaaaagcgtatcagcgcgggtacggtaccgccgggccgatcatcgatcgcgactgg
cttatcgaattaaatgaagggttgatccttctttccggcgggcgcatgggcgacgttgga
cgcagtcttttgcgtggtaacagcgcgctggtagatgagtgtgtcgcgttttatgaagaa
cacttcccggatcgctattttctcgagctgatccgcaccggcaggccggatgaagaaagc
tatctgcacgcggcggtggaactggcggaagcgcgcggtttgcccgtcgtggcgactaac
gatgtgcgctttatcgacagcagcgactttgacgcacacgaaatccgcgtcgcgatccac
gacggctttaccctcgacgatcctaaacgccctcgtaactattcgccgcagcaatatatg
cgtagcgaagaggagatgtgtgagctgtttgccgacatccccgaagcccttgccaacacc
gttgagatcgccaaacgctgtaacgtgaccgtgcgccttggtgaatacttcctgccgcag
ttcccgaccggggacatgagcaccgaagattatctggtcaagcgtgcaaaagagggcctg
gaagagcgtctggcctttttattccctgacgaggaagaacgtgttaagcgccgcccggaa
tatgacgaacgtctggatactgaacttcaggttatcaaccagatgggcttcccgggttac
ttcctcatcgttatggaatttatccagtggtcgaaagataacggtgtaccggtagggcca
ggccgtggttctggtgcagggtcactggtggcctacgcgttaaaaatcaccgatctcgat
ccgctggaatttgacctgctgttcgaacgtttccttaacccggaacgtgtctccatgcct
gacttcgacgttgacttctgtatggagaaacgcgaccaggttatcgagcacgtagcggac
atgtacggtcgtgatgcggtatcgcagattatcaccttcggtacgatggcggcgaaagcg
gtgatccgcgacgtaggccgcgtgctggggcatccgtacggctttgtcgaccgtatctcg
aaactgatcccgcccgatccggggatgacgctggcgaaagcgtttgaagccgagccgcag
ctgccggaaatctacgaagcggatgaagaagttaaggcgctgatcgacatggcgcgcaaa
ctggaaggggtcacccgtaacgccggtaagcacgccggtggggtggttatcgcaccgacc
aaaattaccgattttgcgccgctttactgcgatgaagagggcaaacatccggtcacccag
tttgataaaagcgacgttgaatacgccggactggtgaagttcgacttccttggtttgcgt
acgctcaccatcatcaactgggcgctggagatgatcaataagcggcgggcgaagaatggc
gagccgcctctggatatcgccgcgatcccgctggatgacaagaaaagcttcgacatgctg
caacgctcggaaaccacggcggtattccagcttgaatcgcgcggcatgaaagacctgatc
aagcgtctgcaacctgactgcttcgaagatatgatcgcactggtggcacttttccgcccc
ggtccgttgcaatcagggatggtggataactttatcgaccgtaaacatggtcgcgaagag
atctcctatccggacgtgcagtggcagcatgaaagcctgaaaccggtactggagccaacc
tacggcatcatcctgtatcaggaacaggtcatgcagattgcccaggtgctttctggttat
accctcggtggcgcggatatgctgcgtcgtgcgatgggtaagaaaaagccggaagagatg
gctaagcagcgttctgtatttgctgaaggtgcagaaaagaacggaatcaacgccgaactg
gcgatgaaaatcttcgacctggtggagaaattcgcgggttacggatttaacaaatcgcac
tctgcggcctatgctttggtgtcatatcaaacgttatggctgaaagcgcactatccggcg
gagtttatggcggcggtaatgaccgccgatatggacaacaccgagaaggtggtgggcctg
gtggatgagtgctggcggatggggctgaaaatcctgccaccagatataaactccggtctt
taccatttccacgtcaacgacgacggcgaaattgtgtatggtattggcgcgatcaaaggg
gtaggtgaaggcccgattgaggccatcatcgaagcccgtaataaaggcggctacttccgc
gaactgtttgatctctgcgcccgtaccgacaccaaaaagttaaaccggcgggtgctggaa
aaactgatcatgtccggggcgtttgaccgtcttgggccacaccgcgcggcgctgatgaac
tcgctgggcgatgcgttaaaagcggcagatcaacacgcgaaagcggaagctatcggtcag
gccgatatgttcggcgtgctggccgaagagccggaacaaattgaacaatcctacgccagc
tgccaaccgtggccggagcaggtggtgttagatggggaacgtgaaacgttaggtctgtac
ctcacgggacaccctatcaaccagtatttaaaagagattgagcgttatgtcggaggcgta
aggctgaaagacatgcacccgacagaacgtggtaaagtcatcacggctgcggggctcgtt
gttgccgcgcgggttatggtcaccaagcgcggcaatcgtatcggtatctgcacgctggat
gaccgttccgggcggctggaagtgatgttgtttactgacgccctggataaataccagcaa
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
ggtgggcttaaaatgaccgctcgcgaagtgatggatattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctctgggacaattccagtacatctctactatcag
agggcggatgcacgcgcgcgattgcgttttggcgcgacgtggcgtgtctctccgagcgat
cgtttattaaacgatctccgtggcctcattggttcggagcaggtggaactggagtttgac
taa
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