Escherichia coli O81 ED1a (commensal): ECED1_1561
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Entry
ECED1_1561 CDS
T00827
Symbol
ydbK
Name
(GenBank) putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; 4Fe-4S cluster binding protein
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Pathway
ecq00010
Glycolysis / Gluconeogenesis
ecq00020
Citrate cycle (TCA cycle)
ecq00620
Pyruvate metabolism
ecq00650
Butanoate metabolism
ecq01100
Metabolic pathways
ecq01110
Biosynthesis of secondary metabolites
ecq01120
Microbial metabolism in diverse environments
ecq01200
Carbon metabolism
ecq01210
2-Oxocarboxylic acid metabolism
Module
ecq_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
ECED1_1561 (ydbK)
00020 Citrate cycle (TCA cycle)
ECED1_1561 (ydbK)
00620 Pyruvate metabolism
ECED1_1561 (ydbK)
00650 Butanoate metabolism
ECED1_1561 (ydbK)
Enzymes [BR:
ecq01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
ECED1_1561 (ydbK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4_16
Fer4
Fer4_21
Fer4_10
Fer4_9
Fer4_6
Fer4_2
Fer4_8
Fer4_17
Fer4_18
Fer4_4
Transketolase_C
Fer4_15
FlgM
Motif
Other DBs
NCBI-ProteinID:
CAR07759
UniProt:
B7MUJ3
LinkDB
All DBs
Position
complement(1532895..1536419)
Genome browser
AA seq
1174 aa
AA seq
DB search
MITIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGLKNVWGDTPRVVEMQSE
AGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGELTPFVLHVAARTVATHALSIF
GDHSDVMAVRQTGCAMLCAASVQEAQDFALISHIATLKSRVPFIHFFDGFRTSHEINKIV
PLADDTILELMPQAEIDAHRARALNPEHPVIRGTSANPDTYFQSREATNPWYNAVYDHVE
QAMNDFAAATGRQYQPFEYYGHPQAERVIILMGSAIGTCEEVVDELLTRGEKVGVLKVRL
YRPFSAKHLLQALPGSVRNVAVLDRTKEPGAQAEPLYLDVMTALAEAFNNGERETLPRVI
GGRYGLSSKEFGPDCVLAVFAELNAAKPKARFTVGIYDDVTNLSLPLPENTLPNSAKLEA
LFYGLGSDGSVSATKNNIKIIGNSTPWYAQGYFVYDSKKAGGLTVSHLRVSEQPIRSAYL
ISQADFVGCHQLQFIDKYQMAERLKPGGIFLLNTPYSAAEVWSRLPQEVQAVLNQKKARF
YVINAAKIARECGLAARINTVMQMAFFHLTQILPGDSALAELQGAIAKSYSSKSQDLVER
NWQALALARESVEEVPLQPVNPHSANRPPVVSDAAPDFVKTVTAAMLAGLGDALPVSALP
PDGTWPMGTTRWEKRNIAEEIPIWKEELCTQCNHCVAACPHSAIRAKVVPPEAMENAPAS
LHSLDVKSRDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEE
KINYDFFLNLPEIDRSKLERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRML
IANATGCSSIYGGNLPSTPYTTDANGRGPAWANSLFEDNAEFGLGFRLTVDQHRVRVLRL
LDQFADKIPAELLTALKSDATPEVRREQVAALRQQLNDVAEAHELLRDADALVEKSIWLI
GGDGWAYDIGFGGLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRK
ARKDLGVSMMMYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLAL
SHDQMRQLTATGFWPLYRFDPRRADEGKLPLALDSRPPSEALEETLLHEQRFRRLNSQQP
EVAEQLWKDAAADLQKRYDFLAQMAGKAEKSNTD
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgattactattgacggtaatggcgcggttgcttcggtggcgtttcgcaccagtgaagtt
atcgccatctaccctattacccccagttccacgatggcagaacaggctgatgcatgggcc
ggaaacggcttgaaaaacgtttggggagacacaccacgcgtggttgaaatgcagtcggaa
gcgggtgctatcgctaccgtgcatggtgctttgcaaactggtgccctctcaacatcgttt
acgtcatcgcagggtttgctgctgatgatcccaacgctgtacaaactggcaggcgaactg
acgccgtttgtcctgcatgttgcggcacgtaccgttgccacacatgcactctctattttt
ggcgatcattccgacgttatggcggtgcgccaaacgggttgcgcgatgttgtgtgcagca
agcgtccaggaagcgcaagactttgctctcatttcgcacatcgcgacgctgaaaagccgc
gtgccatttattcatttctttgatggtttccgcacatctcacgaaatcaataaaattgtc
ccgctggccgatgacacgattcttgaactgatgccgcaggcagaaattgatgctcatcgc
gcccgggcactcaacccggaacatccggtgatccgcggtacgtccgccaatcctgacact
tatttccagtctcgcgaagccaccaacccatggtacaacgcggtctatgaccatgttgaa
caggcgatgaatgatttcgctgccgcgacaggtcgtcagtatcagccgtttgagtattac
gggcatccgcaagcggaacgggtaattatcctgatgggctcagccattggcacatgtgaa
gaagtggttgatgaattgctgacccgtggcgaaaaagtcggcgtgctgaaagttcgcctg
taccgccccttctccgccaaacacttgctgcaagctctgccgggatccgtgcgcaacgtg
gcggtactggacagaaccaaagagcctggtgcccaggcagaaccgctctatctggatgtg
atgaccgcactggcagaagcctttaataatggcgagcgtgaaaccctgccccgtgtcatt
ggtgggcgctatggtctttcatccaaagaatttggcccggactgtgtactggcggtattt
gccgagctcaacgcggctaaaccgaaagcgcgctttacggttggtatttacgatgatgta
accaatctgtcactgccgttgccggaaaacaccctaccaaactcggcgaaactggaagcc
ttgttttatggccttggtagtgatggcagcgtttccgcgaccaaaaacaatatcaagatt
atcggaaattccacgccgtggtacgcacagggctattttgtttacgactccaaaaaggcg
ggcggcctgacggtttctcaccttcgcgtgagcgaacagccgattcgttccgcttatctc
atttcccaggctgattttgttggctgccaccagttgcagtttatcgataaatatcagatg
gctgagcgtttaaaacctggcggcattttcctgctcaacacgccgtacagcgcagctgaa
gtgtggtcgcgcttgccgcaggaagttcaggccgtgctaaaccagaaaaaagcgcgcttc
tatgtgattaacgcggcgaaaatcgcccgcgaatgtggcctggcggcccgtattaatacc
gtcatgcagatggcttttttccatctgacgcagattctgcctggcgatagcgccctggca
gaattgcagggtgcgattgccaaaagttacagtagcaaaagccaggatctggtggaacgc
aactggcaggctctggcgctggcacgtgaatccgtagaagaagttccactgcagccagtt
aatccgcatagcgccaatcgaccgccagtggtttccgatgccgctcctgattttgtgaaa
accgtaaccgctgcgatgctcgccgggcttggcgacgccctccccgtttcggcgctgccg
ccagacggcacctggccgatgggcaccacgcgctgggaaaaacgcaatatcgccgaagag
atccccatctggaaagaggaactctgtacccaatgtaaccactgtgtcgccgcttgccca
cactcagctattcgcgcaaaagtggtaccgcctgaagcgatggaaaacgcccctgccagc
ctgcattcgctggatgtgaaatcgcgtgatatgcgcgggcagaaatatgtcttgcaggtg
gctccggaagattgcaccggttgtaacctgtgcgtcgaagtttgcccggcgaaagaccgt
cagaatccagagattaaagccatcaatatgatgtcgcgcctggaacatgtcgaagaagag
aaaatcaattacgatttcttcctcaacctgccagaaatcgatcgtagcaaactggaacgt
attgatattcgtacatcgcagctgattacaccgctgtttgaatattccggtgcttgctcc
ggttgtggcgagacgccgtatattaaattgctgactcagctctatggcgaccggatgttg
atcgctaatgccactggctgttcttcaatatacggcggtaacctgccttcaacaccatat
accaccgatgccaatggtcgtggaccggcatgggcgaactcgctgtttgaagataacgcc
gaatttggccttggtttccgcctgacggtcgatcaacaccgtgtccgcgtgctgcgtctg
ctcgatcaatttgccgataaaatcccggcggaattactgactgcgttgaaatcagacgcc
acgccagaggttcgtcgtgaacaggttgcagctttacgccagcaactcaacgatgttgct
gaagcacatgaactgctgcgtgacgcagatgccctggtggaaaaatcaatctggctgatt
ggtggcgatggctgggcttacgatatcggctttggcggtctggatcatgtattgagtttg
acggaaaacgtcaacattctggtgctggatacgcaatgctattccaacaccggtggtcag
gcatcgaaagcgacaccgctgggtgcagtaactaagtttggcgagcatggcaaacgtaaa
gcgcgtaaagatcttggcgtcagtatgatgatgtacggtcatgtttatgtggcgcagatt
tctctcggcgcgcagctgaaccagacggtgaaagcgattcaggaagcggaagcgtatccg
gggccatcgctgatcatcgcttatagcccatgtgaagagcatggttacgatctggcactc
agccacgatcagatgcgccaactcactgctaccggcttctggccgttatatcgcttcgat
cctcgtcgtgccgatgaaggcaaactgccgctggcgctggattcacgcccgccgtcagaa
gcactggaagaaacgttacttcacgagcagcgtttccgtcgtctgaattcgcagcagcca
gaagtggcggaacagttatggaaagatgctgcagctgatttgcaaaaacgctatgacttc
ctggcacaaatggccggaaaagcggaaaaaagcaacaccgattaa
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