Escherichia coli O8 IAI1 (commensal): ECIAI1_3814
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Entry
ECIAI1_3814 CDS
T00828
Symbol
rph
Name
(GenBank) ribonuclease PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
ecr
Escherichia coli O8 IAI1 (commensal)
Brite
KEGG Orthology (KO) [BR:
ecr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecr03016
]
ECIAI1_3814 (rph)
Enzymes [BR:
ecr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
ECIAI1_3814 (rph)
Transfer RNA biogenesis [BR:
ecr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ECIAI1_3814 (rph)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
CAR00611
LinkDB
All DBs
Position
complement(3886516..3887256)
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AA seq
246 aa
AA seq
DB search
MFQAGDFNMRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLK
GQGQGWITAEYGMLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALRAAVDLKALGEFTI
TLDCDVLQADGGTRTASITGACVALADALQKLVENGKLKTNPMKGMVAAVSVGIVNGEAI
CDLEYVEDSAAETDMNVVMTEDGRIIEVQGTAEGEPFTHEELLTLLALARGGIESIVATQ
KAALAN
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
ttgtttcaagccggagatttcaatatgcgtccagcaggccgtagcaataatcaggtgcgt
cccgttaccctgactcgtaactatacaaaacatgcagaaggctcggtgctggtcgaattt
ggcgataccaaagtgttgtgtaccgcctctattgaagaaggcgtgccgcgcttcctgaaa
ggtcagggccagggctggatcaccgcagagtacggcatgctgccacgttctacccacacc
cgtaacgctcgtgaagcggcgaaaggtaagcagggtggacgcacaatggaaatccagcgt
ctgatcgcccgtgctcttcgcgcggcagtagatttgaaagcgctgggtgagttcaccatt
acgctggactgcgacgtgcttcaggctgatggtggcacgcgtaccgcgtcgattacgggt
gcctgcgtggcgctggcagatgcgctacagaagctggtggaaaacggcaagctgaaaacc
aacccgatgaaagggatggtagccgcagtttctgtcggtattgtaaacggtgaagcaatt
tgcgatctggaatacgttgaagactcagccgcagagaccgacatgaacgtagtgatgacc
gaagacgggcgcatcattgaagtgcaggggacggcagaaggcgagccgttcacccatgaa
gagctactcaccttgttggcgctggcccgagggggaatcgaatccattgtagcgacgcag
aaggcggcgctggcaaactga
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