Escherichia coli O8 IAI1 (commensal): ECIAI1_4490
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Entry
ECIAI1_4490 CDS
T00828
Symbol
holC
Name
(GenBank) DNA polymerase III, chi subunit
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
ecr
Escherichia coli O8 IAI1 (commensal)
Pathway
ecr03030
DNA replication
ecr03430
Mismatch repair
ecr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ECIAI1_4490 (holC)
03430 Mismatch repair
ECIAI1_4490 (holC)
03440 Homologous recombination
ECIAI1_4490 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecr03032
]
ECIAI1_4490 (holC)
03400 DNA repair and recombination proteins [BR:
ecr03400
]
ECIAI1_4490 (holC)
Enzymes [BR:
ecr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ECIAI1_4490 (holC)
DNA replication proteins [BR:
ecr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ECIAI1_4490 (holC)
DNA repair and recombination proteins [BR:
ecr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ECIAI1_4490 (holC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
CAR01232
LinkDB
All DBs
Position
complement(4568143..4568586)
Genome browser
AA seq
147 aa
AA seq
DB search
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP
AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTSFADFATAFTEVVDFVPYE
DSLKQLARERYKAYRVAGFNLNTATWK
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgcgacgttctaccttctggacaatgacaccaccgtcgatggcttaagcgcc
gttgagcagctggtgtgtgaaattgccgcagaacgttggcgcagtggtaagcgcgtgctc
atcgcctgtgaagatgaaaagcaggcttaccggctggatgaagccctgtgggcgcgtccg
gcagaaagctttgttccgcataatttagcgggagaaggaccgcgcggcggtgcgccggtg
gagatcgcctggccgcaaaaacgcagcagcagcccgcgcgatatattgattagtctgcga
acaagctttgcagattttgccaccgctttcacagaagtggtagacttcgttccttatgaa
gattctctgaaacaactggcgcgcgaacgctataaagcctaccgcgtggctggtttcaac
ctgaatacggcaacctggaaataa
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