Etheostoma cragini (Arkansas darter): 117936858
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Entry
117936858 CDS
T07493
Name
(RefSeq) transcription factor Sox-8-like
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117936858
Transcription factors [BR:
ecra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117936858
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
117936858
NCBI-ProteinID:
XP_034716192
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All DBs
Position
21:20496058..20499107
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AA seq
456 aa
AA seq
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MTEENRSPADTPRSPAGSDSSMSQQGSGSESPTSPSGSEAQEAARTAGMTHQLESGVEDE
RFPACIRDAVSQVLKGYDWSLVPMPSHGEKGPKSKPHVKRPMNAFMVWAQAARRKLADQY
PHLHNAELSKTLGKLWRLLSETEKLPFVAEAERLRTQHKKDYPDYKYQPRRRKNPKPGQG
DCGPGPVQQQQQDLYKTEPGGVHHHYDPDRTGQSHGPPTPPNTPNTDLHTGTKHEAPRPV
DSSSTGSAPASGRQNIDFSNLDISELSTDVISTIDGFDVHELDQYLPPNSHASTLLTTPD
SSHGQNNPSGSLILPSIYSHSHTWTPKSGISTGMPTSSCSRDAHGLHEDTSQKLQIKTEQ
MSPGHYSSSSSSTPPPPQPEYAPLGSGLCPSSINQSDYTDLQSSSFFSAFPGYPPGLYQY
PYFHSSRRPYSLTLAPPPHSPPSGWEQPLYKTLSRP
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagagaaccggtccccggcagacactccgcgcagtccagcaggcagcgacagc
tccatgtcccagcagggatcgggttcggagtccccgacctctccatcagggtccgaagca
caggaggcagcgcgcacggccgggatgacgcaccagctggagagcggcgtggaggacgag
cgcttccccgcctgcatccgcgacgcggtgtcccaagtgctgaaaggctacgactggtcg
ctggtcccgatgccctctcatggggagaaagggccgaagagcaagcctcacgtgaagcgg
ccgatgaacgcgttcatggtgtgggcgcaggcggcccggaggaagctggctgaccagtat
cctcatcttcacaacgcggagctcagcaagaccctgggcaagctgtggcgacttctctct
gaaacagagaagcttcccttcgttgcggaggccgagaggctgaggacgcagcacaagaaa
gactacccggactacaagtaccagcctcggagacgcaagaaccccaaaccaggacagggg
gactgcggaccaggaccggtacagcagcaacagcaggacttgtataagacagaaccaggg
ggggtgcaccatcattatgatccagacaggacaggtcagtctcatgggcctccaacaccc
cccaacacccccaacactgacctccacacggggaccaaacacgaggccccgcggcctgtc
gacagcagcagcaccggctccgctcctgccagcggccggcagaacatcgacttcagcaac
ctggacatctccgagctcagcaccgacgtcatcagcaccatcgatggctttgacgtccac
gagttggaccagtacctccctcccaacagccacgcctcgactcttctaaccacgccagat
agcagccacggacaaaacaacccttctgggtcccttattctgcccagcatctactcccac
tcccatacctggacacccaaaagtgggatttccactggaatgccaacttcctcttgcagt
cgtgatgcgcatgggctccacgaggacaccagccaaaaacttcagattaagacagaacag
atgagcccaggtcactacagcagctcctcctcctccacacctccaccgccacaaccggag
tacgcccccctcggctcgggcctctgcccttcctccatcaaccaatctgactacactgac
ctccaaagctccagtttcttcagcgccttcccagggtaccctcccggtctgtatcagtac
ccgtactttcactcgtctcgcaggccttacagcctgaccttggcaccacctccacacagt
cctccctctggctgggagcagcctctctacaaaactctctccaggccttga
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