Etheostoma cragini (Arkansas darter): 117938695
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Entry
117938695 CDS
T07493
Name
(RefSeq) DENN domain-containing protein 5B-like isoform X1
KO
K20164
DENN domain-containing protein 5
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117938695
Membrane trafficking [BR:
ecra04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
117938695
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
RUN
uDENN
dDENN
PLAT
PAP1
Motif
Other DBs
NCBI-GeneID:
117938695
NCBI-ProteinID:
XP_034719366
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All DBs
Position
23:complement(18687785..18765512)
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AA seq
1356 aa
AA seq
DB search
MSGSSAVSGAAPCRFAHYFAICGIDTETGLEPDELAALYQWLEADRQGRDPDTAATGENF
EQSPLKRTFKSKVLARYPQNVEWNPFDQDAVNMLCMPKGLSFRTQADQRDPQFHSFIITK
EDGSRTYGFVHTFYEEVTSPQICSAMHTLYQMHNAESTPSSSSSSSSSSMDSLASSLDEA
DSPTSSSSSSRRAGGYDSSRDTLYVSKALCLITPMPFMHACRRFLSQLHRAVTADTAPPL
PLESYVHNILYEVPLPAPGRSLKFHGVYEPIVCQRPGLGELQLADFPLAEAFTLLGAENL
VQVFTCTLLEMQILLYSHDYQRLMTVAEGITTLLFPFQWQHVYVPILPASLLHFLDAPVP
YLMGLQSKEGADRSKLELPQEANLCFVDIDNHYIELPEDFPQFPNKTELIQELSEVLLSF
GLSANTGAPPRTRTSPSSAPGSTPSTPGRERKTVALRQLEDDGRNGNLAVEELAVLQLLQ
GNATLERLQALTKRTGVTVARVDALRAGVKAQSTEGQGGRTAAEEEELRNAKLNVQLREV
FASRFTTMFADYEAFVIQSAPDLESWLTNREQMHNFDKASFLSDQPEPYLPFLSHFIETQ
MFATFIDNKIMSQWEEKEPLIRVFDARIDKARLYNVRAPSHRSSSYQRCSILKESAQAIE
QRLMKIDHTAIHPHLLDMKIGQGKYTQGFFPKLQADVLNTGPTNNKWSHRTATAQRKKDR
HRQQTEHLALDNDLKEQGCLVLQNSMAFWEWDKASPPPIKPPKKSASASCLKYMQEARSL
GKNLRQPKLSDLSPAVIAQTNWKFVEGLLKECRMKTKRMLVEKMGREAVELGHGDANITG
LEENTLIASLCDLLERIWSHGLQVKQGKSALWSHLLHYQAREEKLDQSESPVSQVPERRK
SDSFIAMPSLRVSLIQDMRHIQSMSEIKTDVGRARAWIRLSLEKKLLSQHLKQLLSRQAL
TKKLYKRYAFLRCEEEKEQFLFHLLSLNAVDYFCFTSVFTTIVIPYRVVIIPIKKLSNAM
TTSNPWVCASGELGDSGIMQIPKNVLEMTFDSAFRPHTHISALFKCQNLGKLTTVQLGHD
NAGLLAKWLVDCVMVRNEITGHTYRFPCGRWLGKGVDDGSLERVLIGELVVPSGEEDSGR
GCRTPPLQRSPSQSRRISITSLSGRGYKPTSAQIQEAIGESVNNIIKHFHKPEKERGSLT
VLLCGENSLVAALEQFFNHGFKSARLFQKTVFVWDFVEKAVAYMESADQMGDLQETAEPL
GMTCQSLCHYVNSINSTPRNIGKDGKFQLLVCLGARDRLLPQWLPLLVECPLILRMYEDT
ALLRDRSTVNTLIGVLETIHDFPITLEASLVKGIDL
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggagctccgcggtgtccggcgcggcaccctgccgcttcgcccattactttgct
atttgtgggatagacacagaaactggactggaaccggacgaattagcagctttgtaccaa
tggctagaagcagaccgccaaggcagggatccagatactgcagccacaggtgaaaacttt
gagcagagccccttgaagaggacgttcaagtccaaagttttggcacgctaccctcagaac
gtggagtggaatcccttcgatcaggatgctgtcaacatgctgtgtatgcctaaaggcctg
tcattcaggacgcaggcagaccagcgtgatccacagttccactccttcatcatcacaaag
gaagatggctctcggacctacggcttcgttcacaccttctacgaggaggtgaccagccca
cagatctgctctgccatgcacaccctctaccagatgcacaacgcagagagcaccccttca
tcctcctcctcctcctcctcctccagcatggactcccttgccagcagtttagacgaggca
gactcccccacatcctcatcttcctcctctcgcagggcgggtggctacgactcatcgcgg
gacaccctctacgtgtccaaggccttgtgtctgatcacgcccatgcccttcatgcacgcc
tgccgacgcttcctgtctcagctgcacagggccgttactgcagacaccgcccccccgctg
ccactggagagctacgttcacaacatcctgtacgaggtgccgcttcccgctccgggacgt
tcgctcaagttccacggtgtttacgagcccatcgtgtgccagaggcccgggctaggggag
ctgcagctggccgatttcccactcgcagaggcctttactctgctcggagcggagaacctg
gtccaagtgttcacctgcaccctgctggagatgcagatccttctatactcacatgactac
cagcggttgatgacagtggccgagggcatcaccacgctgctgtttcccttccagtggcag
catgtctatgttcccatcctgccggcctctcttcttcacttcctggatgctcctgttccc
tacctgatgggcctgcagtcaaaagagggcgcagaccgctccaaactggagcttcctcag
gaggccaacctgtgttttgtagacattgacaaccactacatcgagcttccagaggacttt
ccacagttccccaataagacagagttaatccaggagctcagcgaggtgctgcttagcttt
ggcctttctgccaacacaggggccccaccaaggacccgcaccagtcccagcagcgctccc
ggcagcaccccctccacccctggtagggagcgtaagactgtggctctccgtcaactggag
gacgacgggcgtaatggaaaccttgcagtagaggagctggctgtgctgcagctgctgcag
ggaaacgccaccttggaaagactgcaagcgctgaccaaacgcaccggggtgacagtggcc
cgtgtggacgccctgagggccggagtcaaagctcagagcacagaggggcaaggaggccgg
acagcagctgaagaggaggagcttaggaacgccaagctgaacgttcagctgagggaggtg
ttcgccagccgcttcaccaccatgtttgccgactacgaagccttcgtcatccagagcgcc
ccggacctggagtcctggctcaccaacagggagcaaatgcacaactttgacaaggcctcg
ttcctgtccgaccagccagagccctacctgcccttcctctcccacttcattgagacacag
atgtttgccaccttcatcgacaacaagatcatgtcccagtgggaggagaaggagcccctg
atccgcgtcttcgacgctcgcatcgacaaggcccgcctctacaacgtccgcgctcccagc
caccgatcctccagctaccagaggtgctccatcctcaaggagtctgctcaggccattgag
cagcgactgatgaagatcgaccacaccgccatccacccacacctgctggacatgaagatc
ggtcagggcaaatacacccagggattcttccccaaactgcaggctgacgtgctcaacacg
gggccgaccaataacaagtggtctcataggacggcaacagctcaacgaaagaaagaccgt
cacagacaacaaacagagcatctggcccttgacaacgacctgaaagagcagggctgtctg
gttttgcagaactccatggcgttttgggagtgggacaaagcgtcccctccgcctatcaaa
ccgcctaaaaaatctgcctctgcgtcctgcctgaaatacatgcaggaggcccgcagcctg
gggaagaaccttcgacagcccaaactgtctgatctgtctcccgctgtcatcgcccagacc
aactggaagtttgtggaggggctgctcaaggagtgtcgcatgaagacaaagcgtatgctg
gtggagaagatgggccgggaggcggtggagctgggccatggtgacgccaacatcaccgga
ctggaagaaaacactctgatcgccagcctgtgtgacctgctggagaggatctggagccat
gggctgcaggtcaaacaggggaagtcggccctgtggtcccacctgctgcactaccaggcc
cgagaggagaagctggatcagtcagagtcgccagtgtcacaagttcctgagaggagaaag
tctgactctttcatagcgatgccgtctctacgtgtgtcactgatacaggatatgaggcat
atccagagtatgtcagagataaagacagatgtgggacgagcgagggcctggatccgtctt
tcccttgagaagaagctgctctctcaacacctcaaacagctgctgtctcgacaagcctta
accaagaagctgtacaaacgctacgcgttcctgcgctgtgaggaggagaaggagcagttc
ctcttccacctgctctctctcaacgctgtcgactacttctgcttcactagtgtcttcacc
accatcgtgatcccgtatcgagttgtcattattcccatcaagaagctgagcaacgccatg
accacctccaacccctgggtgtgtgcgtcaggagagttgggagactcgggcatcatgcag
atccccaagaatgtcctggagatgacctttgattctgctttcaggcctcacacgcacatc
tccgccttgttcaagtgtcagaacctggggaagctgaccacggtgcagctgggccatgat
aacgctggcctactggctaaatggctggtggactgtgtgatggttcgcaatgagatcaca
ggacatacctataggttcccctgtggtcggtggcttggtaagggcgtggacgatgggagc
ttggagagggtcctgattggtgagctggtggtgcccagcggagaggaggattctggaaga
ggctgccgtacacccccgctgcagcgctcgccatcccagagcagacgcatcagcattacg
tcactgtctggaagaggatataaaccaacttcagcccaaatccaagaggctattggggag
tccgtgaacaacatcatcaaacacttccacaagccagagaaagagagaggcagcctgact
gtcctgctgtgtggagagaacagtttggtggcggctctagaacagttcttcaatcatggc
ttcaagtctgcccggctcttccagaagactgtgtttgtgtgggactttgtggagaaggct
gttgcctacatggagtcagcagaccagatgggagaccttcaggagaccgcggagcccttg
gggatgacctgtcaatcactctgtcactacgtcaactcgatcaactccacccccaggaac
atcggcaaagatgggaagttccagctgctggtctgccttggagccagagaccgtctgctg
ccccagtggctccccctgctggtggagtgcccactgatcttgcggatgtacgaggacacg
gccctgctcagagaccgctccactgtcaataccctcatcggagtcctggagacgatccat
gacttccctatcacactggaagcttcgctggtcaaaggcatcgacctttag
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