Etheostoma cragini (Arkansas darter): 117941020
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Entry
117941020 CDS
T07493
Name
(RefSeq) neural cell adhesion molecule L1.1-like isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117941020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117941020
04090 CD molecules [BR:
ecra04090
]
117941020
04091 Lectins [BR:
ecra04091
]
117941020
Cell adhesion molecules [BR:
ecra04515
]
Immunoglobulin superfamily
L1 family
117941020
CD molecules [BR:
ecra04090
]
Proteins
117941020
Lectins [BR:
ecra04091
]
I-type lectins (Siglecs)
117941020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
Tissue_fac
C1-set
Ig_6
ASFV_J13L
Motif
Other DBs
NCBI-GeneID:
117941020
NCBI-ProteinID:
XP_034722013
LinkDB
All DBs
Position
Unknown
AA seq
1284 aa
AA seq
DB search
MCVSQRQWTGFRAPCPPARSLLLLALSLLSSNPQLVQGAISIPKDYRVQNISQPPVLTET
PVSLTAFSPEDINLPCEASGKPKPTFRWVKDGEAFGSEREESGTLRAQDDVPLSSYEGVY
HCYASNNLGTAVTHSVQVIVEAQPVLPKQQKVHKRGKEGDSMMLTCNPPESSTPPNIHWM
DKRMVHIKQSDRVTVGLDGNLYFSNLLKNDSRDDYICNAQYFTAGTILPDTAVRLTVQAS
NDVAHGRKPHLFRPQGSHTSLLALRGHSLVLECIPKGLPTPKVEWTKKDGALERTGGSVD
HFGRRLHFDSISEEDDGEYECRAFNEHGSTSHRFTVSVEASPYWVKQPENLLYSPGETIR
LDCQADGIPTPSITWSINGQPLTEVDYDPRRSVSGGVLILRDVEFADTAVYQCEAANKHG
SVLLNTHLYVVELPPQILSSDGVVYRVIEGGDILLRCESFGSPRPHVTWEGEDNVPLLSD
PRVSLQTDGTIKLSGASLGDSGAYTCSVPLTNISITAHLEVLNRTVIVASPQDVHVLRGR
STLLDCGFYKDPRLIKVQIRWRKDGQEVQESSPDDKHTIFGNGTLKVTDVQSDDGGVYSC
EVITHLDHVKASGSITVVARPDPPTNLSLSDIEDHHLTLRWTPGNPHNSPVIEFVVEARE
ERHAVAGAARWEEWRRVPGGFHHAELTLHRFCTYRFRVIAVNVLGASDASAPSTAYDTPP
GVPDSNPTGVRSESTDPKTLIITWDEMDKRFHNSHGFLYKVFWRRADGVHWNHQDVTSPP
FTVNDTGTYTPFEIKVQAVNSLGEGPAPEPEIGHSGEEEPEEAPTGVTMTVTNSTVRVEW
IEAQNVRGQLLGYKIYIRRLGPRGGRGRRSLGNLHQDREKEEKSERGMDRNRESWVVVVH
GLKTSQEVSGLQLYSRYELSLTAFNSKGEGPPSPPHNFSTPEGAPGPPASLSFESPSDKS
LILYWTPPEEINGVLLGYVVQYRQETETELQIQMFRDPSRTHMELDSLDPRSHYVFNVIA
RTSAGDGPPITRRGATLLDGVPPSNITIVSSNTSLNLSWVPGERERNHGFVIRFLRKTPG
AQWEESEVLNSTQGSYWLTGLQPGSQYHLMVRHGNTTQWEDVTRTIGPVPSPMPGGFSTQ
GWLIGLISAIVLLLLILLVLCLLKRSRGGKYAVKDKEEKEVDSEARPMKDETFGEYRSLE
SDDEKRSSQPSLCADSHAGSEDSLAEYGDSVDIQFNEDGSFIGQYSGRGPVAHGNESSGP
ASPVTTVPPPPIAPSMSSVLHRPS
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtctcagcgtcagtggacgggttttagggcaccgtgcccccctgcccgctcc
ctcctcctcctggctctgtccctgctgtcgtccaatccgcagctggtccagggcgcaatc
agcatccccaaagactaccgagtgcagaacatttcccagccaccagtcctcacagagact
cctgtgtcactcacggccttttccccagaagacatcaacctgccctgtgaggcctccggg
aaacccaaacccactttccgctgggtgaaggatggagaggcgttcggctcagagcgggag
gagtcggggaccctgcgagctcaagacgacgttcctctgagctcgtatgaaggcgtgtat
cactgctacgcctccaacaacctgggcaccgccgtcacacacagtgtccaggtcatcgtg
gaggctcagccggtccttcctaaacaacagaaggtccataagagggggaaggagggcgat
agcatgatgctgacctgcaaccccccagaaagctccaccccccccaacatccactggatg
gacaagaggatggtgcacataaagcagagcgacagggtgacggtgggcctcgacgggaac
ctttacttctccaacctcctgaagaacgacagcagagacgactacatctgcaacgcccag
tacttcaccgccggaaccatcctccctgatactgcagtcagactcacagtgcaggctagt
aatgacgtggcccatggcaggaagcctcacctgttccgtccccaggggtcccacacctcc
ctgctcgccctcagaggacacagcctcgtccttgagtgtatccctaaaggcctaccaact
ccaaaggtggagtggacgaagaaggacggcgccctggagaggaccggcggaagcgtggac
cacttcggacggcggctccacttcgacagcatcagcgaggaagacgacggagaatacgag
tgcagagccttcaatgagcacggatccacctcgcaccgcttcaccgtcagcgtggaagcc
tctccatactgggtgaagcagccagagaacctgctctactctccgggagaaaccattcga
ctcgactgtcaggctgatggcatcccgaccccgtctatcacctggagcatcaacggccag
ccactcacagaggtggactatgacccccggcgtagcgtgtctggcggcgtgctgatcctg
agagatgtggagtttgccgacacggcggtgtatcagtgcgaggccgccaacaagcacggc
tccgtcctgctgaacacccacctctacgtcgtggagcttcctcctcagatcctgtcctct
gacggtgttgtgtaccgggtcatcgagggtggagacatccttctgcgctgtgaatccttc
ggctcgccgaggccgcacgtcacatgggagggggaggacaatgtccctctgctgtctgac
cctcgtgtctcactgcagacggacgggaccatcaaactatctggcgccagcctcggggac
agcggcgcctacacctgctccgtcccactcaccaacatctccatcacggctcacctggaa
gtcctcaaccggacggtgattgtggcaagcccacaggacgtccatgtcctcagaggacgc
agcactctgctggactgcggcttctacaaagacccccgtctgatcaaggtccagatcaga
tggagaaaagacggacaggaagtccaggaatcatctccagatgacaaacacaccatcttt
gggaatggcaccttaaaggtgacagacgtccaatcagacgatggcggggtctattcctgt
gaggtcatcactcacctggaccacgtgaaggccagcggctccatcactgtggtcgcccgg
ccagacccccctacgaatctgtctctgtctgatattgaggaccaccacctcactctgaga
tggaccccaggaaacccacacaacagcccggtcatagagttcgtggtggaggcgcgggag
gagcgccatgcggtggcgggggcggcacgctgggaggagtggagaagagtccctgggggg
ttccaccacgcagagcttaccctccatcggttctgcacctaccgcttcagggtcatcgcc
gtcaacgtgctgggcgccagcgacgccagcgcaccgtcaacggcgtacgacacgccgccc
ggcgttcctgacagtaacccgacgggggtccgcagtgagtccactgacccaaagactctg
atcattacctgggatgagatggacaagcgcttccacaacagccacggcttcctgtacaag
gtgttctggcggagggctgatggggtacactggaaccaccaggacgtaacgagcccaccg
tttacggtcaacgacacagggacgtacacgccgtttgagatcaaagtccaggctgttaat
tctctgggagaaggaccggcaccggagccggagatcggacactctggagaggaagagccg
gaggaagcgccgactggagtcacgatgaccgttacgaacagcacggtccgagtcgagtgg
atcgaagcccagaacgtccgcggtcagctgctgggatacaagatctacatccggaggctg
gggccacgtgggggtcggggccgcaggtctctggggaacctgcaccaggacagagagaaa
gaggagaagtcagagagggggatggacaggaacagggagagttgggtggtggtggtccac
ggcttgaagacctcacaggaggtctcggggctgcagctgtactctcgctacgagctgtcc
ctcacagccttcaacagcaaaggagagggtcctccctcccccccgcacaacttcagtacc
cctgagggagcaccgggtcctcctgcatcgctgagtttcgagagtccttccgataaatcc
ctgatcctgtactggactcctccagaagagattaacggggtcctgctgggatatgtggtg
caatatcgacaggagacggagaccgagctgcagatacagatgttccgtgatccaagtagg
actcacatggagttggactctctggacccaaggagccattacgtcttcaacgtgatcgca
cgcacgtccgcgggagatggaccgcccatcacccggaggggggccaccctgctggatgga
gtccctccgtccaacattaccatcgtttccagcaacacgtccctgaacctgagctgggtt
cccggggagagagagaggaaccacggcttcgtcatccgcttccttcgcaagacccccggg
gctcagtgggaggagtcagaggtgctgaactccacgcagggctcctattggctgacaggc
ctccaaccagggtctcagtaccacctgatggtccgacacgggaacaccacgcagtgggaa
gatgtgactcggaccatcggcccagtgccgtcgccgatgccgggggggttctccactcag
ggctggttgattggtctgatcagcgccattgtgttgctgcttctcatcctgctcgtcctc
tgtctcctgaaacgcagccgggggggcaagtatgcagtgaaggacaaggaagagaaggaa
gtggactctgaggctcggccaatgaaagacgagaccttcggagagtacagatctctggag
agtgatgatgagaagcggtccagccagccgtccctgtgcgctgacagccatgctggcagc
gaggactctctggcggagtacggggacagcgtggacatccagttcaacgaggacgggtcc
ttcattggccagtacagtggccggggacccgttgcccacggcaacgagagctccggcccc
gcctcccctgtcaccacggtgccgcctccacccatcgctccgtccatgtccagcgtcctc
caccggcccagttag
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