Etheostoma cragini (Arkansas darter): 117942557
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Entry
117942557 CDS
T07493
Symbol
usp16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117942557 (usp16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecra01002
]
117942557 (usp16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117942557 (usp16)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117942557 (usp16)
Peptidases and inhibitors [BR:
ecra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117942557 (usp16)
Ubiquitin system [BR:
ecra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117942557 (usp16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
117942557
NCBI-ProteinID:
XP_034723987
LinkDB
All DBs
Position
3:complement(332524..340594)
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AA seq
846 aa
AA seq
DB search
MGKKRGTDKSNREEDDIELTGPSCRHIKKGTDQTLLKKLSGNSDWTSCQDCEHEESEEHL
STAAARDSEEEKETAPIWMCLKCGHRGCGRNSENQHAIKHSETPRSDPHCLVISLDNWSV
WCYICDDEVQYSRTGHLAQLVTNLKKQTSADPVKRPQKRVKEEDSLLEVDQKTDTVKAEK
SEDTENKDHQKKNAKEESVGKSQKSGPPEDNGGFSVKGLSNLGNTCFFNAVIQNLSQTQL
LRQTLNEVTKEKMSVNIKPVASSDLEPIIMQLNQPGSLTLSMCQLLNEIQETKKGVVTPR
ELFTQVCKKAARFKGFQQQDSQELLRYLLDGMRAEEIKRASSGIMEALKGSRQISDGEQL
KTLVKEYEKNGFPKNFVDQVFGGETTSTIMCQQCKTVSVVTEMFLDLSLPVSDEAFRKKN
QKKSVHNTSESSQEGRTSPALTKRIDYIPTGSSSKYQQKKAKKQAKKQAKHQKRQQKIEG
RVTLDSLSSPSHTESEPTDSAADDKDHDQDTREEASLREGNPARASVSEQDQKNSDMVQD
EKENEEDEDSVTDCDSSATSSVNNRFTVLSEEQHSKESVFDDDNISDMDQEGEEDTRLVS
EMEKVTLDDAFIEEPDAVEQRMEIEDEPLEAKEYTVVSQDPELAFQTLATRTAPEKQECS
VQSCLFHFTEVETLTQNNSLLCVTCTKRQSNKDKAGESKKNVYTDALKQMLISSPPPVLT
LHLKRFQQNGYSICKVNRHVQFPLILDLAPFCVVKCENLMEGDTQVFYSLYGIVEHSGTM
RSGHYTAYVKARPECPKSSSNGLTAEGHAEPSRGSWFHISDTSVQPVSESKVQSCQAYLL
FYERIL
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaaagggggacggacaagagcaatagagaggaggatgacatcgaactgacc
ggtccatcctgcaggcatattaagaaggggacagaccaaactcttctaaagaaactctcc
gggaactctgattggacgagttgccaggattgtgagcatgaagaaagtgaagagcatctc
agcaccgccgcggcccgggactctgaagaggaaaaagaaacagcacccatatggatgtgc
ttaaaatgtggccatagaggatgtggacgcaactctgagaaccagcatgccatcaaacat
tctgagactcctcggtcggatccgcattgcctcgtgatcagtctggacaactggagtgtg
tggtgttacatatgtgatgatgaagtccagtactccagaacgggacatttggctcagctg
gtgaccaatctaaaaaagcaaacctccgcagatcccgtaaagagaccgcagaaaagagtg
aaggaggaagacagcttgttggaagttgatcaaaagacagacactgtaaaagcagagaaa
agtgaggacacagaaaacaaggaccaccaaaagaaaaatgccaaggaggagagtgttggg
aaatcccaaaagtctggcccacctgaagacaatggtggtttttcagtgaaggggctgagc
aacctgggaaacacatgtttctttaatgcagtcattcagaatctctctcaaacacagctc
ttaagacagactctgaacgaagtgaccaaagagaaaatgagtgtaaacattaaacctgtt
gcctcatcagacctggagcctatcataatgcagttaaaccagcctggatcccttactttg
tctatgtgtcaactactcaatgagatccaggaaaccaagaagggtgtggtaacaccacgg
gagttgttcacacaagtttgtaaaaaggctgccaggttcaaaggatttcagcagcaagat
agccaggagctgctgcgctaccttctggatgggatgcgagcagaggagatcaaaagagca
agctcagggatcatggaggcattgaaaggatctagacaaatctcagatggagagcagctg
aaaacattggttaaagagtatgagaaaaatggttttccaaaaaactttgttgaccaagtt
tttggtggggaaaccaccagcaccataatgtgtcagcagtgcaaaacggtgtctgtagtc
acagagatgtttttggatctttcccttcctgtttctgacgaggcattcagaaagaagaac
cagaaaaaatctgttcacaacaccagtgagtcaagccaggagggcaggaccagccctgct
ttgaccaaacggattgactacattccaaccgggtccagcagcaagtaccagcagaagaaa
gccaagaagcaggcaaagaagcaggcaaagcatcaaaagaggcagcagaagattgagggc
agagtcactttggacagtctctcatctccgagccacaccgagagcgaaccgactgattct
gctgcagatgacaaggaccatgaccaggacacgcgtgaagaagcctcactgagggaagga
aatcctgcacgagccagtgtgtctgaacaagaccagaagaacagtgacatggtccaggat
gagaaggaaaacgaagaggatgaagattcagtgaccgactgcgactcatcagctacatca
tccgtcaacaaccgctttaccgtcttatcagaggagcagcactcgaaggagagcgtcttc
gacgatgacaacatatctgacatggatcaggaaggagaagaggacacgcggctggtgagt
gaaatggagaaagtaaccctggatgacgccttcatagaagagcctgatgccgtggagcaa
agaatggagattgaagatgagccactggaagctaaagagtacactgtagtaagtcaggac
ccggagctggccttccaaacactggctaccaggacagcccctgagaagcaggagtgttca
gtccagtcatgcctttttcacttcacagaagtagaaaccctcacacagaacaacagcctg
ctgtgtgtcacttgcactaaacggcagtcaaacaaagacaaagccggagaatccaagaag
aatgtctacactgatgctttgaagcaaatgttgatctcttcccccccaccagtgcttacc
cttcatttgaagagattccaacagaatggatacagcatttgtaaggtgaacagacatgtc
caattccccctgattctggatctagctcctttttgtgtggttaaatgtgagaacttgatg
gagggagacactcaggttttctacagtttgtacggcatcgtagagcacagcggaacaatg
aggtcaggccattacacggcgtatgtgaaagcacgacccgagtgccctaagtcctcatcc
aacggactcacagctgaaggacacgctgagccgtccagaggatcctggtttcatatcagc
gacacaagcgtccagcccgtgagcgagagtaaagtccagagttgccaagcctacctcctc
ttctatgaaagaattctttaa
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