Etheostoma cragini (Arkansas darter): 117943071
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Entry
117943071 CDS
T07493
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecra01002
]
117943071 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117943071 (usp47)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117943071 (usp47)
Peptidases and inhibitors [BR:
ecra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117943071 (usp47)
Ubiquitin system [BR:
ecra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117943071 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
117943071
NCBI-ProteinID:
XP_034724870
LinkDB
All DBs
Position
1:complement(19026373..19045351)
Genome browser
AA seq
1365 aa
AA seq
DB search
MEMVPSQENQFVPKEIQNAAEEPRVLCIIQDITSAKTVNERLTLNLPASTTLSKLYEDVA
HKAGYVKATFDLAWGNSPDMVPLDHSSEMPLSDSGFEPGGKRNFLQLTDKDGEQPQIASD
ESGTADSSGLDDSSQERIIGPLPRDGTAGCSGDYSSPSYSYSSILNKSDTGYVGLVNQAM
TCYLNSLLQTLFMTPEFRNALYNWEFEETEEDPVTSIPYQLQRLFVLLQTSKKRAIETTD
VTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECG
YESWRIDTYLDIPLVIRPFGASQAYGSVEEALQAFIQPETLDGPNQYFCERCKKKCDARK
GLRFLHLPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPDELDMSPFMDVEDEKSPQTESCT
DSGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTGSTERVLKPKSLLTFELFSVMVHSGS
AAGGHYYACIKSYSDGQWYSFNDQHVSKITQDDIRKTHGGSSGSRGYYSSAFASSTNAYM
LIYRLKDPSRNAKYLSAEDFPEHIKSLVQKEKESEEQEKRQREIERNTCKIKLFCMHPVK
MMMESKLEVHKDKTLKEATEMAYKLMELEDLVSLDCCRLVKYDEFHEYLERSYEGEEDTP
MGLLLGGVKSSYMFDLLLETRKPEQAFQPYKPGEVMVKVHVVDLKSENIASPVSVRAYLN
QTITEFKQLIAQATGLSAESMRVVLERCYNDLRLLYVPNKTLKAEGFFRSNKVFVESSES
TDHQVAFTDSVLWKLLDRHGNTIRLLVLLPEQSPGTLANRTLCQNVGGDCDVPLEGSNGN
RKSVDAILEESTEKLKNLSLQQQQQQGSSPSDSQKSSETSDFEHIESPTQEDSNSSLCVA
ADNRELENRIRATAGGSSSASSDPENHFACEERSDSEVNNDRSTSSVDSDILSSSHSSDT
LCNADSGPLQLANGLDSHSITSSRRSKAHEGKKETWDTAEEDSGTDSEYDDNGKSKAEAQ
YLYFRSEPFSQDDSSSEAHKCLVVHVDKRITLAAFKQNLEPYVGVTSTQFKVFRVYANNQ
EFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKFLVDTVFAKGM
TVRQSKEELLPQLKEQCKLDLSIDRVRLRKKTWKNPGTVFLDYHVYEEDISISSNWEVFL
EVLNEPEKMKSMSQLAVLTRRWRPAAMKLGPFQEVILESSSVEELKEKLSEMSDVPLESL
EFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVVFYRDSTEEPMELSEE
ARNELMKKESSRLLKTGHRVSYSPRKEKALKIYLDGGPAKDPVQD
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcctagccaggagaaccagttcgtacccaaagagatccaaaatgcagcc
gaggagcccagagtgctgtgtatcattcaggatatcaccagtgcaaagacggtcaatgag
aggctgaccctcaacctgcctgcttctaccaccctctccaaactatatgaagatgttgcc
cacaaagctggatatgtgaaagccacttttgaccttgcttggggaaactcgcccgacatg
gtgccactggaccacagcagtgagatgcccctttcagattctgggtttgagcctggtggg
aagaggaatttcctccagctcacggacaaggatggagagcagccccagattgcatcggat
gagtcaggaacagcagacagcagtgggctggatgacagttcccaggagcggataatcggg
cccctaccgagagatggcactgcaggctgcagtggtgactacagcagtccgtcttactcc
tactcgtccatcctcaacaaatctgatacgggttacgtaggtctggtcaaccaagctatg
acctgctatttgaacagtctcctacaaactctgttcatgaccccggagttcagaaatgcg
ctctacaactgggagtttgaggagactgaagaggatccagtcaccagtataccctaccag
ctgcagaggctgtttgttctgctgcagactagtaagaaacgggcgatcgagaccaccgat
gtgacgcggagctttggctgggacagcagcgaagcttggcagcagcatgacgtccaggag
ctgtgcagagtcatgtttgatgccctggagcaaaagtggaagcagacagagcaggctgac
ctgatcaaccagctgtaccaggggaaactgaaggattatgtccgttgtctggagtgtggc
tatgagagctggaggattgatacttacctggacatccctcttgtgatcagacccttcgga
gccagtcaggcctacggcagtgtggaagaggctttgcaggctttcatccaaccagaaact
cttgacgggcccaaccagtacttctgtgaacgctgcaagaagaaatgtgacgcccggaag
ggtctgagatttctgcacttaccctacctgctgacactgcagctgaagcggtttgatttt
gactacaccactatgcatcgcatcaaacttaacgaccgcatgactttccctgatgagctc
gacatgagtccgttcatggatgtggaagatgagaagtcacctcagacagagagctgcact
gacagtggagcagagaatgaaggaagttgccacagcgaccagatgagcaacgacttttcc
accgatgattgtgtggatgagggcatctgcttggacagcactggcagcacagagagggtg
ttgaagccaaagagtttactgacctttgagctgttctccgtcatggtccattctgggagc
gctgcaggtggccactactacgcctgcatcaaatcctacagtgatggccagtggtacagt
ttcaacgatcagcatgttagcaagatcacccaagatgatatcaggaagacacatggcggg
tcctcagggagcagaggctattattccagtgcctttgcaagctctacaaatgcatatatg
cttatttatagattgaaagatccctcaaggaatgcaaagtatttatctgcagaagacttc
ccagagcacataaagagtttggttcaaaaggagaaagaatccgaagaacaggaaaagcga
cagagggagattgagcgcaacacctgcaagattaagcttttctgcatgcatcctgtaaag
atgatgatggagagcaagctggaagtacacaaagacaaaactctcaaagaagcaacagaa
atggcctacaagctgatggagctggaggacttggtctctctggactgctgccgcctggta
aagtatgacgagttccacgagtacctggagcgctcttacgaaggggaggaggacacaccg
atgggcctgctgctgggaggagtcaagtcctcttatatgtttgacctactgcttgagacc
cgcaaaccagagcaagcgttccagccttacaaacctggagaggtaatggtgaaggtccat
gttgtggatctgaagagtgagaacatcgcctctccagtcagtgttcgggcgtacttgaac
cagacgatcactgaattcaagcagcttattgcacaggctacagggctatctgcagaaagc
atgcgtgtggtcctggagcgctgctataatgacctgcggctcctatatgttccaaacaag
acactgaaagctgaagggttcttcaggagtaacaaggtttttgtagagagctctgagtcg
acagatcatcaggttgcttttactgactcagtcttgtggaaactgttggatcgtcacgga
aatacaattcggctcttagtcttactgcctgagcagtctcctggtaccttggccaacaga
actctttgccaaaacgtaggaggtgactgtgatgtgcccctagagggttcaaatggtaac
aggaaatctgtagatgctatcctcgaggagagcacagaaaagttaaagaatctgtcgctg
cagcagcagcagcagcaaggctccagccccagtgacagccagaaaagctctgaaaccagc
gactttgaacatattgaaagcccaacccaagaggactcaaactcttcactctgtgtggct
gcagacaacagagagttggagaaccggatcagggccacagcggggggcagcagcagcgcc
tcctctgaccctgagaaccactttgcctgtgaggagcgctcggactctgaggtgaacaat
gaccgcagcaccagctcagtggacagcgacatcctgagctccagccacagcagtgacaca
ctctgcaatgcagacagcgggcccctacagctggccaatggcttggactcgcacagcatc
acaagtagccgtcgctccaaagcccatgagggcaaaaaagagacctgggacactgctgaa
gaagactctggaaccgacagcgagtatgacgacaatgggaagagcaaggcagaggctcag
tacctgtacttcagatcagagcctttttctcaggatgactcctcatcggaggcacataaa
tgtttagtggttcacgtggacaagagaataacattagcagcttttaaacagaacctggag
ccatacgttggggtcacctccacccagtttaaggtgtttcgggtgtacgccaacaaccag
gagtttgagagtgtacggctcaacgaaacgctctcatcgttctctgatgataacaagata
actattcggctaggaagagcactgaaaaagggtgaatacagagtgaaagtgtatcaacta
ctggtgaatgaaccagagccctgcaagttcctcgtggacacggtgtttgccaagggcatg
actgtcagacagtctaaagaggagctgctccctcagttgaaagaacagtgtaagcttgac
cttagcattgacagagttcgtctcaggaaaaagacgtggaagaacccaggaacggtgttt
ctggactaccatgtctatgaagaagacatcagcatctcctctaactgggaggttttcctg
gaagttctcaatgaaccggagaagatgaagtccatgtcgcagctagctgtcctgacccgg
agatggagacccgctgcaatgaagctggggcccttccaggaagttattctggagagcagc
agtgtagaagaactcaaggagaagctaagtgaaatgagtgatgttcctctcgaaagccta
gagtttgcaaagggtagaggaacatttccttgtgatatatctgtgttggagatccaccag
gatttggactggaaccctaaggtgtcaactctcaacgtatggcctctgtacatctgtgac
gacggagctgtggtattctacagggacagcaccgaggagcctatggagctgtcggaggag
gcgcgtaatgagctcatgaagaaggagagcagccgtctgctcaagaccggccaccgtgtc
agctactcgccacgcaaggagaaggccctcaagatctacctggatggaggtcctgccaag
gacccggtgcaggactga
DBGET
integrated database retrieval system
