Etheostoma cragini (Arkansas darter): 117943382
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Entry
117943382 CDS
T07493
Name
(RefSeq) transcription factor SOX-13-like
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117943382
Transcription factors [BR:
ecra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117943382
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
117943382
NCBI-ProteinID:
XP_034725360
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All DBs
Position
4:1527169..1575461
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AA seq
612 aa
AA seq
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MVEPSPPALQLLSGGDVSMASVGVKVEQEESCRGGGVISNAEPPKRSPSRGWSGNHPLEA
RQLTPPLSRSPSEGSPGKELPHRRSPLGQKEARTHERPEGQSHFKEVMPTIEKLLNADWK
EKLLDKSTVGAGQLKGTPEALAEKELQLLMMINQLSGLREQLLGAHSEQRNMAALLLEKQ
QQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQVNMPYVMIPAFHHNSQSLSVTSDA
QMALPLQPIPCKPGVDYHMQLLPNPHPTPVKRSSGSFRQDTSQPLNLTSKPKGLELGKTP
SPQNLELGSLALHGAYRSRDFQREVSQSPSRSALSFLGDGDVVTQAIHDAQQLLRGHSTG
ERERDREKEREREKDGGGKMEYKESPHSERISHCERGEDHLSSDSEGRCHPRSLFNNTPL
CIRSFPHPPCADVSSSSGSRWKGMSNQEKQPYYEEQARLSRQHLERYPDYKYKPRPKRTC
IVEGRRLRVGEYKAMMKNRRQEQRATYTHSQTEPQQIHYPRSEGQYPGAAGSVSAASMPF
HHALLEHYLPQVPPALCRSEGQATPTSLPRERERERERERERELERERPPYSEGEESDGG
ERSEGELVLLTD
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggttgagcccagccctccagcactgcagctcctctccggcggggatgtcagcatggcg
agcgtcggtgtcaaagtagaacaggaggagtcctgcagagggggcggagtcatcagcaat
gctgaacctcctaagaggtctccctcacgtggttggtcaggaaatcatccgctggaggcc
cgccagctgaccccaccgctctcccgatccccttcggagggctctccaggtaaggagctg
cctcacagacgaagccccttgggacagaaggaggccagaacacatgaaagaccagaagga
caatcccacttcaaggaagtaatgcctaccattgagaagctgctgaatgctgactggaag
gagaaacttctggataaaagcacagtgggggcaggacaactgaaaggtaccccggaggct
ctggcagagaaggagctccagttgttgatgatgatcaaccagctgagcggtctgcgggag
cagctactaggagcccactcggagcaaaggaacatggccgccctgctgctggagaaacag
cagcagcagatggagctggctcgacaacagcaggaacagatcgccaagcagcagcagcag
ctgatccagcagcagcacaagatcaacctgcttcagcagcagatccaggtgaacatgcct
tacgtgatgatcccggcgttccaccacaacagccagtccctctccgtcacctccgacgcc
cagatggccctgccgctgcaaccaatcccctgcaagccaggcgtggactatcacatgcag
ctgctgccaaaccctcaccccacccctgtcaagaggagcagcggttccttccgacaggat
accagtcagcccctgaacctgacctccaagccaaaggggctggagctggggaaaacacca
agtccgcagaacctggagctgggatctctggcgctgcacggggcctacaggtccagagat
ttccagagagaagtttcccaaagcccgtcacgatcggcccttagtttcctcggagacgga
gacgtggtcacccaggccatccacgatgcccagcagctcctgaggggccacagcaccgga
gagcgagagagggacagggagaaagagagagagagggagaaagatggcgggggaaagatg
gagtataaagagtccccccacagcgagagaatttcccactgcgagcggggtgaggaccac
ctcagcagtgactctgagggtaggtgtcacccgagaagcctgtttaataatactccattg
tgcattcgctcgttccctcatcctccttgtgccgatgtgtcttcgtcttcaggctccagg
tggaagggcatgtccaaccaggagaagcagccttactatgaagagcaagcgaggctgagc
aggcagcatctggagcgctaccccgactacaagtacaaaccccggcccaaacggacctgc
atcgtggagggacggaggctgagggtaggcgagtacaaggccatgatgaagaaccgccgg
caggagcagagagcgacctacacacatagtcaaacagagccccagcagatccactacccc
cgcagcgaaggccagtacccgggcgccgccggctcggtctcggcggcatccatgcccttt
caccacgcgttgctggagcactacctgccgcaggtgccccccgcgctgtgtcgatcggag
ggccaggccacgcccacttccctgcccagagagcgagagagggaacgggagagggaacga
gagagggaactggagagggagcgccctccgtacagcgaaggagaggaaagcgatggagga
gagaggagtgaaggggaactggtgctcctgacagactga
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