Etheostoma cragini (Arkansas darter): 117943484
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Entry
117943484 CDS
T07493
Symbol
chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117943484 (chd6)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117943484 (chd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
BRK
Chromo
ResIII
DEAD
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
117943484
NCBI-ProteinID:
XP_034725534
LinkDB
All DBs
Position
4:complement(30081612..30134889)
Genome browser
AA seq
3186 aa
AA seq
DB search
MTSTYGTLSSEDQAEETETFYVKYRNFSYLHCKWATLEELEKDPRIHQKIKRFRTKQAQM
KHLFTEPDEDLFNPDYIEVDRVLEVAVTTDTETGEEVTHYLVKWCSLSYEEATWELQEDL
DPEKIKEFESIQKLPPDLRHMERPPPEKWQKLDHSRDYRNGNMLREYQLEGMNWLLFNWY
NRKNCILADEMGLGKTIQSITFLYEMFSMGIRGPFLIIAPLSTITNWEREFRTWTHMNVI
VYHGSQISRQMILQYEMFYRDPQGNTIPGVLKFHGVITTFEMIMADSPELKKLHWRCVVI
DEAHRLKNRNCKLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPLQFPSESTFLE
EFGDLKTDEQVKKLQAILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEK
NFSFLSKGANQHNMPNLINTMMELRKCCNHPYLITGAEEKILESFRKYHSPDALDFQLQA
MIQAAGKLVLIDKLLPKLLAGGHKVLVFSQMVRCLDIMEDYLIQRRYTYERIDGRVRGNL
RQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG
QSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSLNGVQQLSKLEVEDLLK
KGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFISSGNRTDISL
DDPNFWQKWAKIAEVEIDSKSEKESLVIDTPRVRKQTRHYNSFEDDELMEFSELDSDSEE
RPCRTRRLGERSRRYLRAECFRVEKNLLIFGWGRWKDILNHGRFKWHLAEGDMEVICRAL
LVYCLRHYKGDDKIKSFIWDLITPTKEGRDQALLNHSGLSAPVPRGRKGKKLKNQLNVSE
VKNADWLVHCNPEVVLQDESYKKHLKQHCNKVLLRVRMLYYLKVEVLGDAANQAQEGIPA
SKPEVSLPDIDYIEIPATWWDAEADKSLLIGVHKHGYERYNAMRADPDLCFLERVGMPDV
TALSAEQGGGEGASDMADSVCKTEEAKDESESKADGGEDRDESSKGEETCSSTDTSDKPD
STGPDSQMAGDLCAQDATLVTTTTTGTGTGVASLHVVQARPLWPTGPALTARLRRLITAY
QRFTLRREPLLRHDFLLHDGLVGMGMGGPGAAHSHHAAGPLAWQLGDELRRCSVVATEPD
PLFLEWQRRWTRREQADFYRTVSSFGVVYDPERKSFDWSQFRALARLERKTDESLEKYFN
SFVNMCRTACKLPPRKEEAAAHMSLPGTSFLGNITAPCWWEDSGLVDPAVLVEPLTEERA
ARTLYRIELLRKIREQVLRHPLLSARLQLCRPSLYLPVWWESGKHDRDLLIGAARHGLSR
TDFYILNDPQLSFLEAHRNYVRGHSAHLHPPSHHHPQHPGLVTHSGITSSSSSNPQLPLP
HCCLYDSGLGRHSPQPPEYPHQSSHLHPHHQHPSVPPSAPSPSSSSSSNPHLHPLPLDAP
NSASPSLGIVPGSRGDFLDCPPLDETLELGALQHDALSADALHGGRASKDALNGFPFNSA
AGGQSMLNSYGVGGTDLDLKLRSDVLVGEQGSSEETGLMAPSVELDQLQAPWDGTDHSSP
AHHMFNESDPILGPPTLETGFLEDEEAQGGDRGGEEGGTLEECLGLPPSSSPSHPSAGDS
VEPLSSSYMLFKDIGVSEEPSADQTDLSASPPPPYVPPPPLSLSDITGHEPQDRLDHSDV
DESLANPVEGGEGQEVGVGFEFDDKEEEEVEDLSRAAMEHTLEKQSDHSLGGEECDQGAD
QSLGVMEVPQLDGIVPEPGEQDEQDLQESFDQAEHKEDLPRDVHPYLGKLGQEATLGCPE
SIEEPGEEVGGLILFHTRDENSLDTETLMGSAAAEDGPAECADLADQVDEISEGQMDHVS
LMDVAVVGPHDETAENELNVKPNEIVLQSIYSEYAQPSCPAASVSSPTVASKPDESSTSG
SGDVGVKTEVSMDQANYEGTVKDLNLPDGSRDYRHRVLTFSFHPDNKDDMLEPNEIKIAP
TLPANSIDTKPSDLKFPLLSDRGGEEKPQQLELPVKVEETKTETSVDVYPDSSEFKHGKF
LSYCVKSENLVTKAEQLDYPVKPETPETKAEDLSLPMKPESLDCKPEVLQFAAYSDGAEI
KSEAKPVALRFAAYTDGAKLKTEAEPEDLRLTAFPDTSAIKPEAKPEALEFRTYPDSSEI
KPQAKPEHLEFTALPQVKAEAKRELLEADSTVLTPKLEQADGLLDASESPGGKGPVKEER
PSTPVAVVEGYVGSPRFAAPISMCEIPDGLHDTREPTIAQLLQEKALYSFSEWPKDRVII
NRLDSICHAILKGKWPSSSEQYDSPGSLVANSCLANSLAQQQQQQQHRASFLPTTASSSV
PGQARAQQTNLGLGFSIPPPLTRLPKYMSRGGACGRGAWRLNSLPLLQERLVAPPYLPEL
KRAGGRRAFDYEAAAAAAKVLAGKSACHTAATTSSGGANPVVAPPSHRTGAAMLINGWQE
TAIDLTKSSGEISTTSGIGTGEGISHHGAGSCHKLPPPPPPITAPLQGSVGMDMAGILQA
GLIHPVTGQIVNGSLRGDDSLRRRRGRRRNVEALYSEFTKSRGLHLPETQGRLEVISHSS
VSSSTSSPSPSPSERPAGPPTPSSSSTPTPTQTPPQPEIVAIDREAASKGLIEWLRQNPG
YSMDLPTFAHSGAGLLHGFVERPKQRRHRCKDPTKLDINSLTGEERVPVVHRGTGRRLGG
AMAPAIKELSRWLDANSEYYVAPDWADVVKHSGFLPEGKFSRILTEPVNRDAGSRRRGRR
PRSEMPKPLLSVSDSASSGLGPPLFMNGGLIGSMDSMVAMQNLRGAIPGIPISGIMAAGF
PHGFSAAIQAGGAGEDAKNGLSMLPMMLHGIPHPHGAGIPQHALFSVGAMMAHTPPPPPH
PSSSSSSSSSSSAAKVTTTTAPSTSEAASPSSTTPSKRERASFSGSGGGEKEPGPEEKGA
TEANKRGAEAAAVITSTSRAHGGAAHLGAGTGSHLTFNPFLIPGMSHGLLYPHMFLPHGG
IMALPAMPPGPGDGSPGSPKRRKKREKEEEREKAATGKGEERESTVKANVSSSSPPVPPS
TSAPDPGPCATDDDGPAEPQEPDSHIPPEGAAAEETEETFKDDGGGATEEEKRDAEEQRQ
AEGEEA
NT seq
9561 nt
NT seq
+upstream
nt +downstream
nt
atgacatccacatatggaaccttatcatcagaggaccaagctgaggagacggagacgttt
tatgtcaagtacagaaatttttcctacctacactgcaagtgggccactctggaagagctg
gagaaagatcccagaatccaccagaagattaaacgcttcaggaccaaacaggcccagatg
aaacacctgttcaccgagcctgatgaggacttattcaacccagactacatagaggtggac
agagtgctggaggtggccgttaccacggataccgagaccggagaagaggtgacccattac
ctggttaagtggtgcagtctgtcctacgaggaggccacatgggagttgcaggaggacctg
gacccggagaagatcaaagagtttgagtccatccagaaactgccaccagacctcagacac
atggagcgtcctcctccggagaaatggcagaagttggaccactccagagattaccggaat
ggaaacatgctcagagaataccagttagagggaatgaactggttactgttcaactggtac
aacagaaaaaactgcatactggccgatgaaatgggtctgggaaagaccatccagtccatc
acctttctgtacgagatgttcagcatggggatccgcgggcccttcctcatcatcgccccc
ctgtccaccatcaccaactgggagagggagtttcgcacatggacgcacatgaacgtcatc
gtgtaccacggctcgcagatcagccggcagatgatcctgcagtacgagatgttttacaga
gacccacagggtaacactatcccaggtgtgctgaagttccacggggtgatcaccaccttc
gagatgatcatggctgactctccggagctgaagaagctgcactggcgctgcgtggtgatc
gacgaagcccatcggctgaaaaacaggaactgcaaactgctggagggactcaaactcatg
aacctggaacacaaggttctgctgacagggacccctttgcagaactcagtggaggagttg
ttcagcctgttgaatttcctggagccgctgcagtttccttccgaaagcaccttcctggaa
gaatttggagatctcaaaacagatgaacaggtgaagaagcttcaggccattctgaagccc
atgatgttgaggagactgaaggacgatgtcgaaaaaaacctggcgcctaaacaagagacc
atcatagaggtggagctgaccaacattcaaaagaaatattaccgggccatcttagagaag
aacttctccttcctgtccaaaggagcaaaccagcacaacatgcccaacctcattaacacc
atgatggagctccgcaagtgctgcaaccacccttaccttatcacaggagcggaggagaag
attctggaaagcttcaggaagtaccacagtccggacgcgctggacttccagctgcaggcc
atgatccaggcagctggtaaactggtgctgatcgacaagctgctgcccaaactgctggcc
gggggacacaaagtcctggtcttctcccagatggtccgctgtctggacatcatggaggac
tacctcatacagagacgctacacttacgaacgcattgacggccgcgtgcgagggaacctg
cgccaggcggccattgacaggttctgcaagcccgactcggaccgctttgtgttcctgctg
tgcaccagagccggagggctgggaatcaacctgacggctgcagatacctgcatcatcttc
gactcggactggaacccccagaacgacttgcaggcccaggcacgctgccaccggattggc
cagagcaaagcggtgaaagtctaccgactgatcaccaggaactcgtacgagagggaaatg
tttgacaaggccagtctgaagctgggactggacaaagccgtcctccaggacatcaaccgc
aagggaagcctcaacggggtgcagcagctttctaagctggaagtggaggatttgttgaaa
aaaggagcatacggagcactgatggacgaagaagacgaaggctccaagttctgtgaggaa
gacatcgatcagatactccagaggcgaactcagaccatcaccatccagtctgaagggaaa
gggtccacgttcgctaaggccagtttcatctcctctggtaacagaacggacatttctctg
gacgaccccaacttctggcagaaatgggccaagatcgctgaggtggagatcgactccaaa
tcggagaaggagtccctggtgattgacacgcctcgggtgaggaagcagacccgtcactac
aactccttcgaggacgacgagctgatggagttctcggagctggacagtgactcggaggag
cggccgtgcaggactcgccgcctgggcgagcgcagccggcggtacctccgtgccgaatgc
ttccgggttgaaaagaacctgcttatctttggatggggtcggtggaaggacatcctgaac
cacgggcggtttaaatggcacctggcggagggagacatggaggtgatctgtagggctctg
ctggtctactgcctgagacactacaaaggcgatgacaagatcaagagcttcatctgggat
ctgatcacacccaccaaggagggccgggaccaggcgctgctcaatcactccggtttatca
gctccggttcctcgtggccggaaggggaaaaaactgaagaaccagctgaatgtttcagag
gtgaagaacgctgactggctggtccactgtaaccctgaggtggtgctgcaggacgagagc
tacaagaaacacctcaaacaacactgcaacaaggtgctactgagggtgcggatgttgtac
tacctaaaggtggaggtgttgggtgacgctgccaatcaagcccaggaggggataccagcc
agtaaacccgaggtgtcactacctgacatcgactacatagagattccagctacgtggtgg
gatgcggaagctgacaaatctctcctcataggagtccacaaacacggctacgagcggtac
aacgccatgcgtgcagatccagacctgtgtttcctggagagagtggggatgccagacgtc
actgcgctgtctgctgagcagggaggaggggagggggcctccgacatggccgacagtgtg
tgcaaaacggaggaggcgaaggacgagagtgaaagcaaagccgacggaggggaggacaga
gacgagagcagcaagggagaagaaacctgctccagcacggatacctccgacaagcctgac
agcaccggtccagactcccagatggcaggtgacttgtgcgcccaggatgcgacattggtc
accacaacgacaacgggaacagggactggggtggcgtctctccatgtggtccaagcccgg
cccctctggcccaccggccccgccctgacggcccgtttacgccgcctgatcaccgcctac
cagcgcttcacgctgcgccgcgagccgctgctccggcacgacttcctgctccacgacggc
cttgtcggcatggggatgggagggcccggggccgctcacagtcatcacgccgccgggcca
ctggcctggcagctgggcgacgagctccggcggtgctcggtggtcgccacggaacccgac
cccttgttcctggagtggcagagaaggtggactcgtcgagagcaagctgatttctaccgc
accgtgtcatcattcggggtggtgtacgacccagagaggaagtccttcgactggtcccag
ttcagagcgctggcccgactggagaggaagacggacgagagtctggagaaatacttcaac
tccttcgtcaacatgtgtaggacggcctgcaaactgcctccaaggaaggaagaagctgca
gcccacatgtccctcccggggacctcgttcctggggaacattactgccccatgctggtgg
gaggattcagggctggtggatcctgctgtgctggtggagcctctgaccgaagagagagct
gcacggactttataccgcatcgagctgctccggaagatcagagagcaggttctccgtcac
ccgttgctctcggcccgcctccagctgtgccgcccctccctctaccttccagtctggtgg
gagtctggcaaacacgaccgtgacctcctgattggggcggcgcgtcacggcctgagccgc
actgacttctacatcctgaacgacccccagctaagcttcctggaagctcacaggaactac
gtcagggggcactcagctcatcttcaccccccgagccaccaccaccctcaacacccgggc
ttggtgactcactctggcatcacttcttcgtcctcgtctaatccgcagctgcctcttcct
cactgctgcctgtatgattcgggtctgggtcgccactccccacagccccccgagtatccc
caccagtcctctcacctccatccccaccaccagcatccctctgtgcctccatcggctcct
tctccttcctcttcctcctcctctaaccctcacctccaccctctgccgctggatgcccca
aattctgcctcccccagtctgggaatagttcctggctcccggggagattttctcgactgt
ccccctctggatgaaaccctggagctgggtgcactgcagcatgatgccctgtctgcagat
gctctgcacggagggagggcgtccaaagacgcccttaacggtttcccgttcaattcggcc
gcgggaggccaaagcatgctcaactcgtacggcgtgggaggaactgacctcgatttgaaa
ctaaggagtgacgtgcttgtaggtgagcaaggctcctcagaggaaacgggcctgatggcg
ccatcagtcgagctggatcagttacaggctccctgggacggcacggaccactccagtcct
gcccaccacatgttcaatgaatcggatcccatcctgggtccccccactttggagaccggc
ttcctggaggacgaggaggcccaggggggagaccggggaggggaggaagggggaactctg
gaggagtgtctgggcctaccaccctcatcctccccgtcccacccatctgcaggagattct
gtggagccgctgtcctccagttacatgctcttcaaggacattggtgtgagtgaggaaccc
agcgcagatcaaacggacctgtcggcgagcccccctcctccctatgtcccccctcctccc
ctctctctatctgacatcactggccacgagccgcaggataggctggaccactctgatgtt
gacgagagcctagccaatcccgtggagggaggagaaggccaggaagtaggcgtagggttc
gagtttgatgacaaggaggaagaagaagtggaagacttgtccagggccgccatggagcac
accttggaaaaacaaagcgatcacagcctgggcggagaggagtgtgaccaaggtgcagac
caaagtttgggagtcatggaagtgccacagctggacgggatcgtgccagagccgggagaa
caggatgaacaggacctccaggagagcttcgaccaggcagagcataaagaggacttgccg
cgagacgtgcatccgtatcttgggaagctgggacaggaggctacccttggttgtcctgag
tctattgaagagcctggagaggaagtgggcgggttgatcctgtttcacaccagggatgaa
aactcgcttgacactgaaacattgatgggcagcgcagctgcagaggatggtccagcggag
tgcgcagatctggcagatcaagtggacgaaatctctgaagggcagatggatcatgtttct
ctgatggatgtcgcagtggttggaccccatgatgaaacggcagagaacgagctcaacgtc
aaacccaacgagatagtgctgcagagcatttactcggaatatgcacaaccttcctgcccc
gctgcctctgtctcatcccctacagtcgcatcaaagccggatgaaagcagcacgagtggc
agcggcgacgtcggagtcaaaacggaagtctccatggatcaggcaaactacgaaggtacg
gttaaagatctgaatttgccagatggcagcagggactataggcatcgagtgctgacgttc
tcctttcatccggacaacaaagacgacatgctggagccaaatgaaatcaaaattgccccg
actctacctgcaaacagtattgacacaaagccgtctgatcttaaatttcctctgttatca
gaccgaggtggtgaggagaaaccacaacaactggagctgccagtaaaggtagaggagacc
aagacggagacgagtgtcgatgtgtaccctgacagttctgaattcaaacatgggaaattc
ctttcttactgcgtgaagtcggaaaacttggtgaccaaagctgagcagttagactatcct
gtcaaaccagaaacgccggagactaaagccgaagatctaagccttcccatgaagcctgag
agcttggactgtaaacccgaagtcctccagtttgcagcctactcagacggcgccgaaatc
aaatctgaagcgaaaccagtagctctccgattcgctgcgtataccgacggagctaagctg
aagactgaggcggagccagaggatttaaggttaacagccttccccgacacctctgccatc
aagcccgaagccaagccagaggctctggagttccgcacctacccagacagctctgagatc
aaacctcaggccaagccggagcacctggagtttacggctctaccccaggtcaaagccgag
gccaagcgagagctgctggaggcagacagcacagtcctgaccccgaagctggagcaggca
gacgggctgctggatgcctcagagagtccgggggggaaaggccctgtgaaggaggagagg
ccatctacaccagtggccgtggtggaaggctacgtgggcagcccccggtttgcagctcct
atttccatgtgtgagatccctgacggcctccatgacacccgggagcccaccattgctcag
ctgctgcaggagaaagcactgtactcgttttctgaatggccaaaggaccgggttatcatc
aaccgcctggacagcatctgccacgccatcctgaaggggaagtggccttcgtctagcgag
cagtacgactcgcccggctccctggtggccaactcttgcctggccaacagtttagcccag
cagcagcagcagcagcagcaccgggccagctttctccccaccacggcctccagctcggtc
ccgggccaggccagggctcagcagaccaacctcggcctgggcttctccatccccccccct
ctcacaagactacctaagtacatgtcgcggggcggcgcatgtgggcgcggagcttggcgc
ctcaactccttgcctctcttacaggagaggctcgtggctcctccgtacctccccgagctc
aaacgagcggggggtcggcgggcatttgactacgaagctgctgctgccgcagccaaggtt
ttagccgggaaatcggcatgccatactgccgccaccacaagctccggtggagctaatcca
gtggtggctccgccctctcatcgcacgggagccgccatgttgatcaacggctggcaagaa
acggccatagacctgaccaagtcgtcgggagaaataagcaccaccagtggcatcgggacg
ggagaaggaatcagtcaccacggcgctggcagctgtcacaagctgccgccaccgccgccc
cccatcacagcgccgctgcaaggctctgtgggaatggacatggctgggatactgcaggca
gggctcatccatcctgtaacgggccaaatagttaacggaagcctgaggggagatgactca
ctgaggaggaggagagggaggaggagaaacgtggaagcactgtactctgagttcaccaag
agcagaggactgcacctcccagagacacagggccgattggaggtgatcagccactcctca
gtctcctcctccacctcctcgccgtccccctctccttccgagcgccccgctggccccccg
acgccgtcgtcctcctccacccccacccccacgcagacgcctcctcagccagagatcgtg
gccatcgaccgagaggcagccagcaaaggtctgattgagtggctgagacagaatccgggc
tacagcatggatctccccacattcgctcattctggagcaggtttgttacatggttttgtg
gagcgtcccaagcaaaggagacatcgctgtaaagacccgacaaagctggatatcaactct
ctgacgggggaggagagggttcctgtggtacaccgaggcaccggacgcaggcttggtggt
gcaatggctccggccataaaggagctatcccggtggctggatgccaactctgagtactat
gtagctccagactgggctgacgtggtcaaacactctggtttcctccctgaagggaagttc
tctcggatcctgacggaacccgtcaacagagacgcgggctctcgccgccgcggccgccgg
cctcgcagcgagatgcctaagccccttctgtccgtctcggactctgcctcatccggcctc
ggccccccgctcttcatgaacggcggattaatcggcagcatggactccatggtggccatg
cagaacctccggggtgctattcctgggattcccatctccgggatcatggctgctggattc
ccgcacggtttctctgcagccatccaggcgggcggagctggggaagacgccaagaatggg
ttgagtatgttacccatgatgctgcacggtatcccgcacccccatggggctgggatccca
caacacgccttgttcagcgttggcgcaatgatggcgcacacgccaccccctcctccccac
cctagctcctcctcttcttcttcttcatcatcgtcggctgcaaaggtcacaacaacgacg
gcaccgtcgacatcagaggcagccagcccctcgtccaccacgccttctaagagagagaga
gcctccttttccggctctggtggaggggaaaaggagcccggcccagaggagaaaggagca
acagaagccaacaaaagaggggcggaggcagcggccgtcatcacctccaccagcagagcc
cacggcggcgccgcgcatctcggggccggcaccggcagccatctcaccttcaaccccttc
ctgatcccgggcatgtcccacggcctgctgtacccgcacatgttcctgccccacggcggc
atcatggcgctgcccgccatgcctcccggcccaggcgacggctccccgggcagccccaag
aggaggaagaagagggagaaagaggaggagagggagaaggcagcaacgggaaagggagag
gagagagaaagtacagttaaggccaacgttagttcctcgtctccccctgtccctccctct
acctcggctccagacccaggcccatgtgcaactgatgacgacggtcctgcagagccccag
gaaccggactcccatatccctccagagggagcggcggcagaggagacggaggaaacattt
aaggacgacgggggaggggcaacagaggaggagaagcgggacgctgaggagcagagacag
gcggagggagaggaagcatag
DBGET
integrated database retrieval system
