Etheostoma cragini (Arkansas darter): 117943586
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Entry
117943586 CDS
T07493
Symbol
ddx28
Name
(RefSeq) probable ATP-dependent RNA helicase DDX28
KO
K20096
ATP-dependent RNA helicase DDX28 [EC:
5.6.2.7
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecra03009
]
117943586 (ddx28)
Enzymes [BR:
ecra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117943586 (ddx28)
Ribosome biogenesis [BR:
ecra03009
]
Eukaryotic type
Other ribosome biogenesis factors
117943586 (ddx28)
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GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
ResIII
DUF6811
Motif
Other DBs
NCBI-GeneID:
117943586
NCBI-ProteinID:
XP_034725704
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All DBs
Position
1:25149056..25151207
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AA seq
567 aa
AA seq
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MHSVKVGYLASAASRALCSSGVHCGEFIQVSACCRFRCSVTQTRFCRTAATPEETVIRVP
RYMKKHIENVKQTRGKNKINTIKAGKLLIQSKDPDLNQSAGYTLGKFEQPNLCSKGWKHN
KSFGDYFTINNIQAVAPFVVDDQDENVEQKVLPTFSNLHICKELVEVLDKIHITHPTTVQ
LQTIPKALKGHNILCAAETGSGKTLSYLLPVVHRLQAKKKSEMYAGSAHRISAVVLVPSR
ELAEQVAAVCRTLCAPLGLLARTVGGGRGVGHIKVVLKKDHPDVLVATPGALVKALRRRF
VDLSELSFFVVDEADTMFDPSFSDMLENILLNANIASDPKETRGPGHKAQLLVVGATFPG
GVGEVLSQVTDLGNMVVVKSKMLHFLMPHVKQTFLKVKGADKIVELHQALKLLQQERGGG
AALVFCNKSATVNWLGYSLDEMGVQHARLQGEMPAAVRSGIFHSFQKGQVDVLICTDIAS
RGLDTSRVRLVVNYDCPESHTDYIHRAGRVGRAGGVEDGEVLSFVTHPWDVELVQNIETA
ARRRTSLPGMESEIREPKPKVVEAEEE
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgcactctgtgaaggtcggctatttagcttcggctgcgtcgcgagctctctgctcaagt
ggagttcactgtggtgagttcattcaggtgtcggcctgctgtcgtttccgttgttctgtc
acgcagactcgcttttgtcgaacagcagctacgccggaagagacagttattcgtgtcccc
cgctacatgaagaagcacattgaaaatgtaaaacagactcgaggcaaaaacaaaatcaac
accatcaaagccggcaagctcctgattcagagcaaggatcctgatctgaaccaatcggcg
ggctacactcttggaaagttcgagcagcccaatctctgctcgaaagggtggaaacataac
aaatcattcggtgattatttcaccatcaacaacatccaggccgttgcgccttttgttgtt
gatgatcaggatgagaacgttgagcagaaagtattgccgacgtttagtaacctccatatc
tgcaaggagctggtggaggttttggacaagatccacattacccatcccaccactgtacag
ctgcagaccatcccaaaggccctgaaaggtcacaacattctctgtgctgcggagacgggc
agtggcaaaacgctgagttacctcctgcctgttgttcacagactgcaagccaagaagaaa
tctgagatgtacgctgggagcgcgcacaggatcagcgccgtggttctcgtgccttccaga
gagctagctgagcaagtggcggctgtgtgcaggactctgtgtgcaccattaggcttgctg
gccaggactgtgggcggcgggcggggtgtaggacacattaaggtggtcttaaagaaggat
catccggatgttttagtggccacgccaggcgctctggtcaaggccctgcggagacgcttc
gtggacttgagtgagctgagcttctttgtggtggacgaggctgacaccatgttcgacccc
agcttctctgacatgttggagaacatcctgctcaacgccaacatcgctagtgatcccaag
gaaacccgaggcccgggccacaaagcccagctgctggtggtgggggccaccttccctgga
ggggtcggggaagtgctcagccaggtgacggaccttggcaacatggtggtggtcaagagc
aagatgctgcacttcctcatgccacacgtcaagcagacgtttctgaaggttaagggtgct
gataagatcgtggagctccaccaagccctgaagcttctccaacaggaaagaggagggggt
gcggctctggtgttctgcaataagtctgccaccgtcaattggctggggtactctctggac
gagatgggggtgcagcacgcacgtctgcaaggggagatgcctgctgccgtgcgttcagga
atcttccactccttccagaagggccaggtagatgtgctgatatgcacagacattgcttcg
cgtggcctggacacatctcgagtgcgcttggttgtcaactacgactgcccggaatcccac
acagactacatccacagggcagggagagtggggagggcaggaggggtggaggacggggag
gtgctcagctttgttactcatccatgggatgtggagctggtgcaaaatattgagaccgct
gcacgcaggagaactagtttgccagggatggaatctgaaatacgtgagccaaaacccaaa
gtagtagaggcagaggaggagtag
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