Etheostoma cragini (Arkansas darter): 117949109
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Entry
117949109 CDS
T07493
Symbol
lrrc56
Name
(RefSeq) leucine-rich repeat-containing protein 56
KO
K25425
leucine-rich repeat-containing protein 56
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ecra03037
]
117949109 (lrrc56)
04812 Cytoskeleton proteins [BR:
ecra04812
]
117949109 (lrrc56)
Cilium and associated proteins [BR:
ecra03037
]
Motile cilia and associated proteins
Dynein assembly factors
117949109 (lrrc56)
Cytoskeleton proteins [BR:
ecra04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
Dynein-related proteins
117949109 (lrrc56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_9
LRR_8
Motif
Other DBs
NCBI-GeneID:
117949109
NCBI-ProteinID:
XP_034735012
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All DBs
Position
8:19083824..19103556
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AA seq
650 aa
AA seq
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MSCCHGSVPQKVRPGTARVLVTELSGSGHINPTPATKPCEDSETAVELYYLSPEKLESLC
GTRDLSRVTSLEICVDTQETALANLGAYLPKLVQLRLNNSTITSVRDLGTSLSHLQVLWM
SRCSLQDLDGISTFSSLKELYVAYNKVSDLSQVGMLINLQLLDLEGNDVDDLVQIQYLRL
CGKLQTLTLEGNPVCVHPNPTAIQTADYSYRAAVRELVPQLRYLDDLKVEEDGLSCISTM
REDWAILQNSIRDSSSSQAATKDEEIADSARPSSRPGSARRPASSQSFIWPLSSAGSRPH
TGSRPMSATRPGVLSPPGSRPGSADFDLTTVEAETSILTHGAGKILFCGNPVQAVRARRE
KLRTAPTKSTFPPRDLPIHVPEHTFDFEEYDVRERVDVFAELRAWREQHSSRLQAIETER
LPQVLAIQHCDEGEDDDDGEVFGGVRNDSSDEEHTAVKHGESLDSPDSSFQSLSPDLHHI
EALSPDVSRLSLPPDTRVCPSPPLSATLTANRKPPGIRARRLRLSHTNSEHAHDFSRVGR
SPGTDTTAGDTDPTLQRVQKWTRTNVPLLPLPAHIPRRPSTSALGKELMDSSTEMDLSNI
QSGSKHLRTPQTSKVLDRPAITRPHTARAALQKHHQHHTHQPCRGSSHPD
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgagttgctgtcatgggtctgtgccccagaaggtccggcccggcacagcacgggtccta
gtgactgagctcagtggatccggccacatcaacccaactcctgccacgaaaccatgcgag
gactcggaaacagcagtggagctttattacctctctccagagaagctggaatcgctgtgt
ggaactcgggacctttctcgcgtgacctcgctggagatctgcgtagacacacaagaaact
gcactggctaaccttggtgcctacttgcccaagctggtgcagctcagactgaacaacagc
acaattacgtcagtaagagacctgggaaccagtctctcccacctgcaggtgttgtggatg
tctcgctgctccctccaagacctagatggcatttctactttctcctccctcaaggaattg
tatgtggcctataacaaagtgtctgacctgagtcaggtcggcatgctaatcaacctgcag
ctgttagatctggaagggaacgatgtggatgacctagtccagattcagtatcttaggttg
tgtggcaaactccagacacttaccctggagggaaaccctgtgtgtgtgcaccctaacccc
actgccatccagacagcagactatagttatcgggctgcagtgagggagttggttccccag
ctgcgctaccttgacgatttaaaggtggaggaagacgggctgagctgcatcagcaccatg
agagaggactgggccattctccaaaactccatcagagacagcagctcctctcaggcggct
actaaagacgaggaaatagcagacagtgcacgtccttccagcagacccggctcagcaaga
cgccctgcttccagccagtctttcatctggcccctctcgtcagcaggctccagaccccac
actggctccagacccatgtcagcaaccaggcctggagttctttcccctcctggatccaga
cctggatctgcagacttcgatctaacaacagtggaagcggaaaccagcatcttgacgcat
ggagctggcaagatcctcttctgtggaaacccagtccaggctgtccgagcaagaagagaa
aagttgaggactgcacccaccaagtctactttccccccccgggacctgcccatccatgta
ccggaacacactttcgactttgaggagtatgatgtgagagaacgcgttgatgtgtttgca
gagctcagagcttggagggagcagcacagcagccgtctccaggccatagagacagaaaga
ttaccacaggtcctggctatccagcattgtgatgagggggaagatgacgatgacggagaa
gtctttggtggtgtaaggaatgacagcagtgatgaagaacacacagccgtgaagcatggt
gaaagcctcgactccccagattcctctttccagtctctttccccggacctgcatcacata
gaagccttgtcccctgacgtgtctcgactctccctgcccccagacaccagagtgtgcccc
tctccccctctcagtgccacactaacagctaatcgcaagccaccagggatccgcgcacgt
aggcttcgactcagccacaccaactccgaacatgcacatgatttcagcagagtagggcgc
tctcctgggacagatacaaccgcaggagacacggacccgacactccagagggtccagaag
tggaccaggactaatgtgcctctgttacccctgcctgcacacataccccgccgcccttcg
acaagtgcactgggtaaagagctcatggactcaagtacagaaatggacttatccaatata
cagtctggcagcaagcatcttagaactcctcagacgtccaaagtcctggacagaccagct
attactcgtcctcacacagccagagcagctctacagaaacatcaccagcaccacacacac
caaccctgcagagggagctcccacccagactga
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