Etheostoma cragini (Arkansas darter): 117951805
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Entry
117951805 CDS
T07493
Symbol
si:ch211-159i8.4
Name
(RefSeq) matrix-remodeling-associated protein 5 isoform X1
Organism
ecra
Etheostoma cragini (Arkansas darter)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
LRR_8
Sp38
LRR_4
LRR_5
B_lectin
LRRNT
Motif
Other DBs
NCBI-GeneID:
117951805
NCBI-ProteinID:
XP_034739615
LinkDB
All DBs
Position
10:complement(3311087..3342423)
Genome browser
AA seq
2553 aa
AA seq
DB search
MALWWCANIFCRLAAAWFPLLFSSLLWQAISPIYAIPSCPRSCSCPGVKEVHCTFRHLTT
IPKTFPKDTERLNLGYNSLTELDGSEFRSLQQLEMLMLHGNDISTIQPGAFYNLRSLQIL
KLSYNKLTLVNSGLLEGLVGLIRLHLDHNLIDFIEPYSFSGLTSLKLLQLEGNLLKEIHP
HTFITVSLLGSFWTSGLKHLHLSDNLLEQLPAVALKTAPRLELLSLHGNPWTCDCQLHWL
IEWSSTHEGVIKCKKERGSSDTCPMCSSPQPLNGSLLLEQTPDKLTCERPSLRSTLKKWD
NPVWAETEAEPDLPYTRDFEKPLGRLTFVLSDSHANSAHVACDVRHPGDSSPMTWTGNPH
SPGELSVNVSLVTVLECEIDRETLQNLWQLVAYYYESPAILERGQQRGNASGVTFQYVQA
INENSPYFTELKGYLVAEPLWLLQPRVTLKLNRQQTTSKKLVMDFTTVITKQVNSHRRTG
DDNDHTMPWALIRKRTAGRVQTALEGSKVNLECSVVTSDQEVKVEWMLPDLSIVEDTTDK
VEISERGELVILNATLSDSGLYHCMVRTIAGVDLVPMRLTIKQLSLSPTAFNGQKIVVEK
GQSFTLPCEVTSVLPSQIMWYLPKNQIVLPTQQTRRAEVMENGTLFVRRLTQEDAGEYTC
LTSNLYGVDMLSHMVEVKGEKTSDRSKVQTAQEQPMLTIGVEEGEGSGGDYQEIVRPFAT
QFPKKVGTHQRNSNVLSKRKRIKDLKRKPNKSVKELDPNRWAEILAKANAKPSVALPTEQ
SLPAPSTVTVQTITSKPTTTAASITTATADNLPLTATPPDISTEPRHFPIHTKAKTEAYP
TEKKVDSPETSESLPEVLQPPPAKSTEPTPHKVGGIGIKTEAVTDRTALGTPQPVDQSEN
KHSGEGRRNNHLVPGQSNRRRPPYRRRKPPMKNVRPHGQPFYHSSNKPKTTVPPTTTTTT
PTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTIPTTMSTTATTTTTTTTTTTTITPVP
TTVENHETLSAEYQTEEDEGEYYEEYNYKDSGSLDAKEDLKSKTPHTSHDLDSSLTNFPS
AREKDVNSSPPNPKTIVTPKKDGMLHPTDRTVEEKETDTVNLKESERQRVKIRTQTEEKV
KDNPNLAGESEREVTTAVEKQEMDKTDTGGIKKDAKKTEREWATQSYNTGDSSRLTTQNR
PRPNTKPLTEQNAPTQAQTSSSKIITSHSTRGRTREEVPQKEHKDLNKAKVKPEIHSFPI
MEPVHPWLHQNKQAGGQTTTSRTTQTNQDRNTGRQGEGNQGRHSQHPRVPPTSHWTSQHH
HHQYYPLYPSWPGQRAFPYPRQGPGSHPVPTHRPWPVPHPWVQSPVVTNRPEITAETVKP
KPTVSGTTGNSKVTLSNPYLPHHHHHHLQNHHVDGRTQTRDQLFLSRLRNRYRQAQLDRI
AQLGRMVTPKPRTSYHNPPSPITPKPNPPSPNRPYIPRPAAPTSYYTYNLQPPNPAKPSS
SSSLSGFITTPHPPHHPTTPGALYGGRWPVGAGRISSRRPTAAPPFPWVLASGSDQLKPR
ITTLTTASVSVLAESDVFLPCKATGNPEPNIAWTKVSTGATIPANTKHGPRFEVFKNGTF
VLRNIQLQDRGQYLCTAQNSLGSDRMVITLAVQTEAPRIQPPKSTEIAVYLGKSVTLDCF
ASGKPPAQISWILPDRTFVREIGTVHTSLSPMSLLQNGTLHIHSLNFSSKGDYKCIASNA
AGADTITYHLHVAALPPTISEEAMDTVIIQPGRSVYVHCSAKGEPVPALKWMLPAGIHVK
TSQFLGRRLFVFPNGTLYVKNVLPVDAGRYECLATNTVGIAKRTVQLEVREDSPSLPRQP
PLPLPVPPTHHHGVPSQQHSVSAMYGSAVYLHCPESTRSTRGTIWQLPSKTIMEHRYSPE
RPIKVFRNGTLRILQLTELDGGNYVCVFQRPNGEDMELFQVEVVMTPPRIEHVRTEQTRV
TFGENFQVDCVATGLPDPEVTWSLPDGTLINNALQSDDSGLRNRRYVIFGNGTLLLQQMG
KRDEGDYTCYAKNKLGKDERKVSVTVGPNAPKIRLKSQSLVTVKLGGSAKLSCQAAGEPT
PRIMWISPRNNVISMSSDKFQITDDGTLVVKNVMLVDEGKYACVARNSAGDDVKNMKLEA
ELQEPFINGMKGMSTTKVMAVSYQTALLHCRVEGKPEPRVWWVTPYGHSLPTPYLGGRFQ
VHRNGSLELRGVRKTDEGRYMCLAKNNLGESSLLVELDVASIAEKPSFAVPNIEILPIKQ
DGETIYLECPARGKPNPEFTWVLPNGTMLTPGVRLQRLTHHLGNGKLEISQPVASDKGVY
RCLAKNVAGQAEKRYALEVGRKPQIRGSTGGMKITYGLNLNLPCTVDGWPQASITWTLPN
GLVLDKPQTIGRIFYFANGTLQVRQVATFDKGTYICKASNSFGSSTLSYPVTVMVFPPRI
TNTLTSITRVNRGSPVKLNCVTSGIPKPDISWTLPGRTTLVPHNRFTVQGGIHMTEEGSL
VIQNPMLTNSGIYKCNAKNALGTDFKSTYLQVV
NT seq
7662 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtggtggtgcgccaatatcttctgcaggttggcagcagcgtggtttcccctg
ctcttctcatcactgctatggcaagcgatctcacccatatatgccatcccatcctgtccc
cggagctgcagctgtccaggcgtcaaagaggtccactgtacgttcagacacctcaccacc
ataccaaaaacctttcctaaagacacagagagactcaaccttggttataacagcctgacg
gagttggatgggtcagaattcaggtcactgcagcaactggaaatgctcatgttgcacggc
aacgacataagcacaatccaacctggggcgttttacaacctgaggtcactacagatcttg
aagttgagttacaacaagctcacattggtgaactctggactgttggagggccttgttggt
ttgattcgtctccatctggaccacaacctcattgactttatagagccgtactccttctct
ggcctgacctccctaaaactcctacagctggaggggaaccttctcaaagagatccaccct
cataccttcataacggtgtcactactaggaagcttttggacctctggactcaagcactta
cacctgtcagacaatctgttggagcagcttcctgccgtagcgctgaagaccgctcccagg
cttgagctcctctctctgcatggcaacccctggacctgtgactgtcagctccactggtta
atagaatggagctccacacatgaaggcgtaataaagtgcaagaaggaacgtggctccagt
gacacttgccccatgtgctcctctcctcaacccctgaatgggagcctgttgctagaacag
actccagacaagctcacctgtgaacggccatctcttcgctccacccttaaaaagtgggac
aatcctgtatgggctgagactgaagcagagcctgacctcccgtacacgcgggactttgaa
aagcctttgggccgtctgacttttgttctctctgacagccatgcaaacagcgctcatgtg
gcgtgtgacgtgcgacaccctggagatagttcacccatgacttggacaggaaatccacat
tcacctggggagttgtctgtcaatgtgtcactggtgactgtcctggagtgtgagattgat
cgggagacgttgcaaaatctatggcaattggtcgcctattactatgaaagccctgctatt
ttggagagaggtcagcagagaggcaatgcaagtggagttacctttcaatatgtccaagcc
ataaatgaaaattctccatatttcacagaattaaaagggtatttggtagcggaacccttg
tggctgcttcaacccagagtcactttaaagctcaacagacagcagacaacaagcaagaaa
ctggtgatggatttcactactgtaatcaccaagcaagtcaacagccatagaaggacggga
gatgacaatgaccacaccatgccctgggctctaattcgcaaaaggacagccgggcgggtt
cagactgctctcgagggttcaaaggttaacttggagtgcagtgttgtcacttcagatcag
gaggtgaaggtggaatggatgcttccagatttgtccattgtggaagatacaactgataaa
gttgaaatttctgaacgaggagaacttgtgattttgaatgccacgctgtctgactcaggc
ctttaccactgtatggtcagaaccatagccggtgtggacttggtgcctatgaggctcacc
atcaaacaactctcactcagccctaccgctttcaatggtcagaaaattgtagttgaaaag
ggacagtcttttaccctcccttgtgaggtgacctcagtcctgcccagtcaaattatgtgg
tacctacctaaaaaccaaattgttcttcccacgcaacagacaagacgggcagaagtgatg
gaaaatgggaccttgtttgtaagaaggttaacacaagaagatgctggggaatatacctgc
ctaacctcaaatctgtatggcgtagacatgctatcacacatggtggaagtcaaaggagaa
aagacttctgataggtccaaagtacagactgcgcaagagcagccgatgttgacgattggc
gtggaggaaggagagggttcagggggagattaccaggaaattgtacgtccttttgctacc
caattccctaagaaggtaggaacacaccaaaggaattctaatgttctttcaaaaaggaaa
agaatcaaagatttaaagagaaaacccaataaatctgtaaaggagttggatccaaatcgt
tgggccgagatattggctaaagctaatgctaaaccaagcgttgctctgcccacagagcag
tcactaccagcgcctagcactgtaaccgtccaaacaattacttccaaacctactactaca
gctgcttcgataacaactgctactgctgacaacttaccccttactgctacccctcctgat
attagtacagagccaagacatttccccatccacacaaaagctaagactgaagcctatcct
acagagaagaaagtggatagcccagaaacatctgaaagtctgccagaggttttacaacca
ccgccagccaaaagtacagaaccaaccccccacaaggttggtgggatcggaataaaaaca
gaagctgtcacagaccgcactgctcttggaacacctcaaccagtcgatcagtcagaaaac
aagcactctggagaggggcgaaggaacaaccaccttgttcctggtcagtcaaacaggaga
agaccaccgtatagacgtagaaaacccccgatgaaaaatgtccgaccgcatggacagccc
ttctaccattcatcgaacaagcccaaaacaactgttcccccaactacaaccaccaccaca
ccaacaacaaccaccaccacaccaacaacaaccaccaccacaccaacaacaaccaccacc
acaccaacaacaaccaccaccacaccaacaacaacgacgaccataccaacaacgatgagc
acaactgcaactactactactactactactactactactactacaataacacctgttcca
actacagtggaaaaccatgaaaccttgtctgctgagtatcagactgaggaagatgaaggc
gaatactatgaagaatataactacaaggatagtggtagtttggatgccaaggaagattta
aaaagtaaaaccccgcatacctctcatgatcttgacagtagccttaccaattttccatct
gctagagaaaaggatgtaaatagctctccacctaatccaaagacgattgtcactccaaag
aaagatggtatgcttcatccaactgatagaactgttgaagaaaaggagacagacaccgtc
aacctaaaggagtctgagagacagagggttaagataagaacacaaactgaagaaaaggtt
aaagacaatccaaatctggcaggagagagtgagagggaggtaacaacagcagtggaaaag
caagaaatggacaaaacagacacaggaggcattaagaaagatgcaaaaaaaactgaaagg
gaatgggccacacagagctacaatacgggggatagcagccgcttaactacacaaaataga
ccaagacctaacactaaacctttaacagaacaaaatgcaccaacccaagcacaaacttca
tcttccaagatcattacctcacattcaacaagaggcagaacaagagaagaagtcccacag
aaagagcataaagatctaaacaaggctaaagtgaagcctgagatccacagtttccctata
atggagccggttcacccctggctccatcagaacaaacaggcaggagggcaaaccactact
tccaggacgacacagacaaaccaagacagaaatacaggaagacagggggaagggaatcaa
ggcagacattcccaacatcccagagtccccccgacctcccactggacttcacagcatcat
caccatcaatactaccctctctacccttcctggccaggtcaaagggcatttccttatcca
aggcaaggtcctgggtcacaccctgtgcccacacacagaccctggcctgtcccccacccc
tgggttcaaagcccggttgtcaccaaccgaccagagatcacagctgaaacagtgaagccc
aaacctacagtttctggaacaacagggaactccaaagttaccctctctaatccctatttg
ccacatcaccatcaccatcatcttcaaaatcaccatgtggatggcaggacccaaaccaga
gaccaactgtttctatcaaggctgaggaacagatacagacaggcgcagcttgatcgcatt
gctcagttagggaggatggtgacacccaaacctcgcactagctaccacaatcctccatct
ccgatcacacctaaacccaaccctccatctccaaatagaccctacatccccagacctgca
gcacccacttcttattacacttacaacctgcaaccaccgaaccctgctaaaccttcatcc
tcttcatcattatctggtttcatcacaacccctcatcctcctcaccatcccaccacccct
ggggctctgtatggaggtcggtggcctgttggagcaggacgtatcagctctcggcggccc
actgctgctccccctttcccatgggtgttggcatctggaagtgatcagctgaagccccgt
attaccactttgaccacagctagtgtgtcagtgctggcggagagtgatgtgttcctgcct
tgcaaagcaaccgggaatcccgaacccaacattgcatggaccaaagtctccacaggtgcc
accatcccagccaacaccaagcatggtccccgttttgaagtcttcaaaaatggaactttt
gttctaagaaacatccagcttcaggatagaggccagtacctctgcacagcccagaacagc
ctcggatcagatcgcatggtcattaccttagccgtccagactgaagcacccaggatccag
ccgcccaagtccacagagatagcagtctacttagggaaaagcgtgactcttgactgcttt
gcttcgggaaaaccccctgcccaaatatcctggattcttcccgacaggacatttgtacgg
gaaatcgggactgttcacacttccctttctccgatgtctctgcttcaaaatggaaccctt
catattcactctctcaatttctccagcaaaggcgactataaatgtattgcaagcaacgca
gcaggtgctgatacaatcacttatcatctccatgtggcagctctgcctccaaccatcagc
gaagaagcaatggatactgtgatcattcagccaggcaggagtgtgtatgtccactgctct
gcgaagggcgaacccgtgcctgctctgaaatggatgctcccagcagggatccatgttaag
acttcacagttccttggacgcaggctgtttgtcttccccaatgggacgctgtatgtgaag
aatgttttgccagttgatgctgggaggtacgagtgtttggccactaatactgtgggcatt
gccaaaaggactgttcagctggaggtgagggaagattccccctccctcccccgccagcct
cctctccctcttcccgtccccccaacccaccaccatggtgtgccatcccaacaacactct
gtctcagctatgtacgggtccgctgtctacctccactgtccagagtctaccagatccact
agagggaccatctggcagttaccctccaagaccatcatggaacatcgatacagtccagag
agaccaattaaagttttccgtaatgggactctgaggattcttcagctgacagagctagat
ggtggaaattatgtgtgtgtctttcagcggcccaatggggaggacatggagcttttccag
gtggaggtggtaatgacccctcccagaattgaacatgtgaggactgaacagacgagggtc
acctttggagaaaacttccaggtggactgtgttgcaacaggcctccctgacccagaagtt
acctggagtctcccagatggaactttaatcaacaacgcccttcaatcggacgacagtggc
cttcgcaaccgccgctatgttatttttggcaatggaactttacttctccagcaaatgggc
aaaagagacgagggcgactacacttgttatgccaagaacaaactgggcaaggacgaaaga
aaagtgagcgtcacagtgggaccgaatgctccaaagattagattaaaatcccaatcattg
gtaacagtaaagttaggaggatcagcaaagttgagttgtcaggcagcaggtgaacctaca
ccaagaattatgtggatctcaccaagaaacaatgtgatttcaatgtcatcggacaaattt
cagatcacggacgatgggacgttagtggtgaaaaacgtaatgctggttgacgaagggaaa
tatgcatgtgtggcacgaaattctgctggtgacgatgttaaaaacatgaaacttgaagct
gaactccaggaaccctttatcaatggcatgaaagggatgagcaccacaaaggttatggct
gtttcctaccaaacagcgctcctgcattgcagagtggaaggaaaacctgaaccaagagtc
tggtgggtcactccttatggccactcgctcccaaccccatacctgggcggtcgcttccaa
gtccaccggaacgggagcttggagctgcgaggggtgaggaaaacagatgaagggaggtac
atgtgtctggctaaaaacaatctgggtgaatcctcacttttggttgaattagacgtggca
tcaatagccgagaaaccaagttttgctgttccaaatattgaaatcttaccgataaagcaa
gacggcgagacaatatacttggagtgccccgctcgcggcaagccaaacccggagttcaca
tgggttctgcccaacgggacgatgctgacgcctggtgttagactccaacgcctcacgcat
catctgggtaacggaaagctagagatctctcaaccagtcgcaagtgataagggagtgtac
cggtgcctggcaaaaaacgtggcaggacaagcggagaaacgttatgcgctggaggtgggc
agaaagccacagatcagaggatctacaggtgggatgaagatcacttacggcctcaacctc
aacttgccctgcactgtggatggctggccacaagcatcgatcacatggaccctgcctaat
ggtctcgttttggacaaacctcagacaattggccggatattttattttgccaatgggaca
ctccaagtcaggcaggtcgccacctttgacaaaggaacctacatctgcaaggcctccaac
tcgtttggctcctcaacgctatcctacccagtcacagtgatggttttccctccacgtatc
accaacacgctgacctcaattacaagagtcaaccggggatccccggtgaagttaaattgt
gttacaagtggtattcccaagccggatatttcatggacgttgcctgggcgcacaacgctg
gttccgcataatcggttcacggtgcaggggggaattcacatgacagaggagggcagtctg
gtcatacagaaccccatgctcacgaactctggcatttacaaatgcaacgctaaaaacgca
ctcggaacagactttaaatctacttacctacaagtggtctga
DBGET
integrated database retrieval system
