Etheostoma cragini (Arkansas darter): 117952482
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Entry
117952482 CDS
T07493
Symbol
chpfa
Name
(RefSeq) chondroitin sulfate synthase 2
KO
K00747
chondroitin polymerizing factor [EC:
2.4.1.175
2.4.1.226
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ecra01100
Metabolic pathways
Module
ecra_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
117952482 (chpfa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ecra01003
]
117952482 (chpfa)
Enzymes [BR:
ecra01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
117952482 (chpfa)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
117952482 (chpfa)
Glycosyltransferases [BR:
ecra01003
]
Glycan extension
O-Glycan
117952482 (chpfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
117952482
NCBI-ProteinID:
XP_034740700
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All DBs
Position
11:19759027..19768164
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AA seq
766 aa
AA seq
DB search
MRFSAFISVLRSVGPVVIGISLGFTLSLLSVNWTEEACYLHGKEGEDVTVGQDGQLKGAR
KPNSISSINDGESEEDFEPRIVPYKQVQQSAPKKVFRAKYISTELGMRERLLVGVLTSKN
TINTLGVAVNRTIGHHLDTVIFFTGTRNRKVPHGMFVISHGDERLIWNMFQNIKYILDHY
INEYDWFYLVQDDAYTEADRIKALVDHLSIDRELYMGSPEEFIGGEMEGKYCSGGFGYLL
SRTLLLRLQPFLENCKNDILSSRPDEWLGRCIIDYTDTNCVSEYQGLQYHHYELEKNSDL
TKEQSEPFKKALTVHPVSDPELMYKLHRYFTDIELQKTYDEIAKLQEEIKNVSVVAFDGN
RSSQWPVGINPPFEPKSRFEVLKWEYFTEEKIYSCIDGSPMCDLQGVDRLDVADVIDVAM
IELNKKYRPVLHLKKQQLINGYRRFDPVRGMEYTLDLQLEVVNQKGHSRSVTKRVHLVRP
LSRIEIIPMPYVTEATRIHIIIPLTLQDRSYVDHFLEVFASNAFETSENAILTFLFIYDP
VEAQQVNQNDIFASVKTQINTYERKYPAVKIPWISVKTETPSQIKFMDIISKKHPVDTLF
FLAHVNTNVNSEFLNRCRMNSINNWQVFFPIHFQDFNPDVAYHNQQHPSTVDLVKDAGHF
DRRSFDEVCFYNSDYMATRNRMVADVQENEEILETLDIFDMFLKYSGLHVFRAVEPSLHQ
QYSFQACNPRLSEDIYHRCVQSNLEGLGSRSQLAMLLFEQEQGNST
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgagattttcagcgtttatttctgtcctgcggtcggtcggcccggtggtaatcggcatt
tctttagggttcacgttgagtttattgagtgtaaactggacggaagaagcatgctaccta
cacggcaaggagggtgaggatgtgactgtgggtcaagatgggcagctcaaaggagcccga
aagccaaactctatttcgagtatcaacgatggggagtccgaagaggattttgaaccaaga
atagtcccttataaacaagtccaacagagtgccccaaagaaagttttcagagctaaatac
ataagcacagagttggggatgcgagagcgtctgttggtcggggtcctgacttccaaaaac
accataaacactctgggggtagctgtcaatcgcaccataggccatcacctggacactgtg
atcttcttcaccggcacgcgcaaccgcaaagtccctcacggcatgtttgtcatctctcat
ggagacgagaggctgatctggaacatgtttcagaatatcaaatacattttagaccattac
atcaatgagtatgactggttttacttagtccaagatgacgcatacacagaagctgacagg
atcaaagccttggtggaccacctgagtatagatcgagagctttacatgggcagtcctgag
gagtttataggaggagaaatggaagggaagtactgttccggagggttcgggtatctcctg
tcacgtaccctgctcctccgactccagcccttcctggaaaattgtaagaacgacatcctg
agttcaaggcccgatgagtggctcggaagatgcatcattgattacacggacacaaactgc
gtcagtgaatatcaggggcttcagtaccaccattatgagttggaaaaaaactctgatctg
actaaagaacagagtgaacctttcaagaaagctctgactgtccatccagtgtctgaccct
gaactgatgtacaagctgcacagatacttcactgacattgaactccagaagacttacgat
gagattgctaagctgcaggaagaaataaagaacgtcagtgtggttgctttcgacggcaac
cgaagctcccagtggcccgtggggatcaatccaccttttgaaccaaaatctcggtttgaa
gtgttgaagtgggaatactttacagaggagaagatttattcatgcatcgatggctctcca
atgtgtgatctgcaaggtgttgaccgcttggacgtggctgatgtcattgacgtagccatg
atagagctaaacaagaaatacaggcctgtcttacatctgaagaagcaacagctgattaat
ggatacaggcgctttgaccccgtcaggggcatggagtacaccttggaccttcagctggaa
gtggtgaaccaaaaaggtcacagccgttccgtcactaagcgagttcatctggtgcgacct
ttgagtcggattgagataatccccatgccctatgtcactgaagccacaaggattcacatc
attatacctcttactctgcaggaccggagctatgttgaccatttcctggaagtctttgcc
tcaaatgcttttgagaccagtgaaaatgccatcctaacattcttgtttatttatgaccca
gtggaggcacagcaagtcaatcagaatgatatatttgccagcgtgaaaactcagataaac
acttatgaacgcaaataccctgcagtaaaaatcccttggataagtgtcaagacagaaaca
ccatcccagatcaaattcatggacatcatctccaagaagcacccagttgacacgctgttc
ttcttggctcacgtcaacacaaatgtcaattcagaatttctgaaccgctgccgcatgaat
tccataaacaactggcaggtgttcttccccatccatttccaggacttcaacccggatgtg
gcctatcacaaccagcagcatccttccacagtcgatctggtcaaggacgcaggccatttt
gaccgtagatcatttgacgaagtgtgtttttacaactcggactacatggcgacacgcaac
agaatggtggcagacgtccaggagaacgaggagattttagaaaccctggacatcttcgac
atgttcttaaagtattcgggtctgcacgtattcagggcggtggagccatcattgcaccag
cagtatagcttccaagcctgcaacccgcgactaagtgaagacatctatcataggtgtgtt
cagagcaacttggaaggtctcggttctcgctcccagctcgccatgctgctgtttgagcaa
gaacaaggaaacagcacttga
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