Etheostoma cragini (Arkansas darter): 117953204
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Entry
117953204 CDS
T07493
Symbol
bcor
Name
(RefSeq) BCL-6 corepressor
KO
K23215
bcl-6 corepressor
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117953204 (bcor)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117953204 (bcor)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
117953204 (bcor)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUFD
BCOR
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Motif
Other DBs
NCBI-GeneID:
117953204
NCBI-ProteinID:
XP_034741921
LinkDB
All DBs
Position
11:10349839..10379750
Genome browser
AA seq
1833 aa
AA seq
DB search
MVDARLTPLAAMGLDRGTLMHDGLRLHGGVVYPGIRALPVDKSREMPSLTYNRDGLPELI
YKPDGPLDSRKPTNGYLGLYKSTPSGLHKPVLVPGAEGLGLERRVGPGEKASELGLAGAG
GSYLRLPWLSPYHEASMYSFMDTSKYAALNMYKASLLSQPNPYLPQHLAYPSLCAAQGGN
VNPAAASAAERLYYMPPYPPSPISSPLVAPPMRIPAVTVAPTALVHCQDKGLGVSPQFAQ
QLHQPSPHSQHHQAAIDRDRSPSRSSRPSRPPSRKGSSSSNTNNTSSNSTSGASTGNNNN
LPIDSSPRASSRLPQPPPPPANIENLLDLQRPVARIGHPPTSSTCSISSSSSSTQSISHP
FSVSSMASEQPSPARPSPHRSRPRDGAPENRSVGVEKRPSRSPSKPKFERPAHQPQATKD
SAEKPLDLSGRMLEFGLPPNGFPVKMDTIASGPRYGLPSSRELLKENLSHSPSSHLHSVV
SSTSSKVPERPEMISTLHSSWVVPNPSPSRTQHTPGLPPSPRPNADLGLSQTKGSSPSVI
KHKGLERVLPQQRSSSCPRIGEPNHNVSSTQHPSLVSSRALSPKPSGEWVKHSPSHSEHP
GHNREGTEKSSQTTKRGETTPEVSSYKRPCLENGHPPGHLYLPQSDAYLNHSLAYANRYL
HYPIPDGMSLHSLPIAGKGPVYPHPVLLGSNSLYPTHLAAKHPLPYHNLPAGSGGEYLTY
NSQEMAHPLMQTHSDKLAERGDATLKPRGQEKTRGTVEECGGHRDHNIGKEMGDGSQIKS
DRETGAQGHGGNQSKTPSSATSREKIVCIDLVHSDTDIESTPTVHKPSAESCSKVNQNEC
CHSNQNMTKTDYEPKHQHHLSHSYLIHSGHSPALKPNHTDRKPEAPFGKPKVLQDKVCPG
VTSSTSPTSLGKFTQAEESLEEQSPSPDPEDQDQSTLRCARTSGERSSGKDKGDRDCRAL
HFSQHYTDVVKEERVCEGETEKEDSIVDLGESQGEGDEDDDEDGLTLSKGCRRSSLAKRI
ANSSGYVGDRFKCVTTELYADSSKLSREQRALQMEVISREGSNISQPAANWEVSSLHFLS
HLPLMGSVSFVLCIAAHSFFSPLPSFLSFISSLCLRPLSFLPTHVSIRLSLLCSGVRPVY
ANNRVPVLQRCGGLNEPLSPGHGAREGAIGASQGGLNDGARKVKRESEGGHCLPPTLTPA
KGYIEEKASSGFGPTRKRQLCLKAEKEDTEWEEGERLSHPEKRAKISTDESEQPSPDEDD
DEVRKLKVCIELKGLRLSKPAAGAASPDASLIKQERAWPQPRLVAPVQSLRERKIRPGEP
EDRAAAHRAEINRKWGCEKLLNGVATSPLPPSQLKDRALPPGSFSGDHGLKEPRRVPPSL
APEPSMGGSPPIKPRRHSDTDKPKGKRPCKTKHTSQREREREKRKEATANSPGQRCVADQ
GAAEDDKLSEQRGAPRKGAASPNHYPYSPVKPCSPATLCPPSLQPQANGRAGGVPPEVAG
VHRTPPAEPPAVRPIPPEARRLIVNKNAGETLLQRAARLGYEEVVLYCLENRVCEVNHRD
YAGYCALHEACARGWLSIVQHLLDNGADINCSAQDGTRPIHDAVENDHLDVVRVLLSYGA
DPTLATYSGRGLLKMTHSDSMERFLTDYFADLQGRSDDDPGLYWEFYGSAVCELSEEGGV
YDILADPPGPEDEDEDDKREVFEFEFSDRPLLPCYNIQVSLSQGPRNWLLLSDVLRWLRM
SGRGFRQAFPHMEVVTVAEAEFYRQASLSQLFSCPEELEGFHADSKDLLDLVEDSGELAA
LLGSTLECLDDRWDHPGDKLKDKIKAIGKLGSS
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgcaaggttgacgcccctggcagcgatggggctggaccgaggcactctgatg
cacgatggtcttcgtctccatggtggggttgtatacccaggcatcagggcactaccagtg
gataagagccgagagatgccctccctcacttataacagggatggtctcccagagctcatt
tacaagcctgatggccctctggacagccgtaagcctacgaatggatacctgggcctctac
aagagcaccccttcaggtctccacaagcctgtgctggttcctggagctgaaggtctaggc
ctggaacgcagagttgggcctggagaaaaggcatctgaattgggcttggcaggtgctggt
ggcagctacctccgcctgccgtggctcagcccctaccatgaagcgagcatgtattccttc
atggacacatccaagtatgcggctctaaacatgtacaaagcatccttgctcagccaacct
aacccctatcttccgcagcacctggcctacccttctctgtgtgcagcacaggggggcaat
gttaaccctgctgctgcctctgctgctgagaggctctactatatgcccccctatcctcct
tctcccatctcttctcccctggttgcgccccctatgaggattcctgcagtcacagtcgcc
cccacggcactggtacactgccaggacaaggggctcggtgtttcgcctcagtttgcacag
cagcttcaccaaccttcccctcattctcagcaccatcaggctgctatagacagggaccgg
tccccaagcaggagcagccgaccaagcagacctccctctaggaagggctctagcagcagc
aacaccaacaataccagtagcaatagcactagtggcgccagtactgggaataacaataat
ctgcctattgattcttcacctcgtgcatcttctcgccttccccaacccccccctcctcct
gctaacattgaaaatttacttgatttacaaaggccagttgctaggattggacacccacct
acctcctccacttgttcaatatcttcctcatcctcatccacgcagtccatttctcatcca
ttctccgttagcagcatggcatcagagcagccctctccagcccggccaagcccccacaga
tctaggccaagagatggggcacctgagaacagaagtgtaggggttgaaaagagacctagc
aggtcaccctccaaacccaaatttgaaagaccagctcaccaaccccaagccaccaaagat
tcagcagagaagcccttggatttatctggaagaatgctggaatttgggttgccccctaat
ggattcccagttaagatggacactatagcatcaggcccacgttatggactgccctctagc
cgggagctactaaaggaaaacctgtcccactctccatcctcccacctgcactctgtggtc
agcagcacttcttcaaaggtcccagagaggccggaaatgatcagcactttacactcctcc
tgggttgtacctaacccgtctccttcccgtacacagcacacaccaggcttgcccccctcc
ccaaggcctaatgcagacctgggcctttcacaaaccaaaggttcctccccctctgtaatc
aaacataagggtctggagagagtactccctcagcaacgtagctcatcgtgtccaaggata
ggggagcccaaccataatgtttcttcaactcagcacccctctctggtcagctccagggct
ctttctcccaaacccagtggggagtgggtcaaacacagcccaagccattcagaacatcca
ggccacaacagagagggaacagagaaatcctcccagactactaagagaggcgaaacgact
ccagaggtgtcctcatacaagaggccttgtttagagaatggtcaccctcctggccacctt
taccttcctcaaagtgatgcatacctgaaccacagtttggcttatgccaatagatacctg
cactaccctatccctgatggcatgtcgctacactccctgccaattgcagggaaaggccca
gtctaccctcacccagtcttactgggtagcaacagcctttaccccacccacttggcagca
aaacaccctttaccctaccacaacttgccagctggttcaggaggggaatacctcacttat
aactcacaggagatggcccatcccctgatgcagactcactcagacaagctggccgaaaga
ggagatgcaactttgaagccccggggacaggagaaaacccggggaactgtggaagaatgc
ggtggccacagagatcacaacattggaaaagagatgggcgacggaagccaaattaagtct
gatagggaaacaggagcacaaggacacggtggcaatcaaagcaaaactccttcctctgca
acgtccagagaaaagattgtctgcattgaccttgtacactcagacacagatattgagtct
accccaacagtccacaaaccatctgctgagtcctgcagcaaggttaaccaaaatgaatgt
tgtcatagtaaccaaaatatgacaaagactgactatgagccaaaacaccaacaccacctt
tcccattcttatctgatccactccggacacagccctgccctgaaacccaatcacactgat
agaaagccagaagctccctttgggaaaccaaaggttctccaggacaaagtctgtcctggg
gtgacatctagcacatccccaacatctctagggaagttcacccaagcagaggagagcctg
gaggaacagagccccagcccagaccctgaagatcaagatcagagcaccttgcgctgtgcc
cgcacatctggggaacgcagttctggtaaggacaaaggggacagagattgccgagctctt
cacttctctcagcactacacagatgtggtgaaggaggagagagtgtgtgagggagagacc
gaaaaggaagacagtattgttgacttaggggagtctcaaggagaaggggatgaggatgac
gacgaagatggcctgactttatctaaaggctgtcgtagatccagtctggccaagaggatc
gctaactcctcaggctacgttggcgaccgctttaaatgtgtcaccactgagctgtatgcc
gactccagcaagctgagccgtgaacagagagccctgcagatggaagtcatatcacgagag
gggagtaatataagtcaacctgcagctaactgggaggtcagttctttacatttcttatca
catctgcctctgatgggctctgtctcctttgtactctgtatcgctgcacactcctttttc
tccccactcccttctttcctctctttcatctcctctctctgcctcaggcccctttccttc
ctccctacccatgtttccatccgtctgtctttgctttgctcaggtgtccggccagtgtac
gcaaacaacagagttccagtcctccagaggtgtgggggcctgaatgagcctttgtcccca
gggcatggggctcgagagggggccataggtgccagccaaggagggctaaatgatggagcc
aggaaggtgaagagggagtcagaaggaggtcattgtttaccccctactttgacaccggca
aaaggatacattgaggagaaggccagctctggctttggacccaccaggaaacgccagctc
tgcctcaaggctgaaaaagaggacactgagtgggaggaaggagagaggctgtcccaccca
gagaaaagagcaaagatttctactgatgagagtgagcagcccagtcctgacgaagatgac
gacgaggttcggaagctcaaggtctgcattgagctgaagggactgcgactcagcaagccc
gctgccggcgcagcttcccctgacgcgtcactaatcaaacaggagagagcatggccccag
ccccgattagtagccccggtccagagcctacgggaacgcaagattaggcctggtgagcca
gaggacagagccgcagcgcatagagccgagatcaacaggaaatggggctgcgagaagctt
cttaatggagtagctacttctccccttccccccagccaactgaaggacagagcgctaccg
ccgggctccttctcaggtgaccatggccttaaagagcccaggagggtccccccatctctg
gccccagagccgtccatgggaggctcccctcccatcaaaccccgtcgccatagtgacaca
gacaaacccaagggcaagcggccatgcaaaaccaaacacaccagtcagagggagcgagag
cgggagaaaaggaaagaagccacagctaacagcccaggccagcgttgtgtggctgatcag
ggagcagctgaagatgacaagctgagtgagcagcgtggcgctccgaggaagggagccgcc
tctcctaatcattatccctactctccagtcaagccctgctcccccgccacgctctgtccg
ccttccctgcagccccaggctaacggcagagctggcggtgtgccaccagaggtggcgggg
gtgcacaggaccccccctgctgagccccccgctgttcgtccgatcccgccggaggctcgt
cggctgatcgtgaacaagaacgccggagagactctgctccagagagctgcacggctcggc
tacgaggaggttgtactgtactgtctggagaacagagtatgcgaggtgaatcacagagac
tatgccgggtactgtgccctccatgaggcatgcgcacgtggctggctcagcatagtccaa
cacctgctggataacggggccgacatcaactgcagtgcacaggacggcaccagaccaatt
cacgatgctgtagagaatgaccacctggacgttgtgagagtcctgctgtcttacggtgct
gaccccaccctggccacatattctggccgtggcctgctcaagatgacacacagcgacagc
atggagcgcttcctcactgattattttgctgaccttcagggccgttcagatgacgacccg
gggctttattgggaattctatggcagcgctgtgtgtgagttgagcgaggagggcggtgtc
tatgacatcctggccgaccctccgggcccagaggatgaggatgaggatgataaaagggag
gtgtttgagtttgagttctctgaccgccctctgctgccttgctacaacattcaggtgtcc
ctctcccaagggccaagaaactggctgctactgtcagacgtgcttcgttggctgcggatg
tctggtcgcgggttccgacaggctttcccccacatggaggtggtgacagtggcagaggca
gagttttaccggcaggcctctctgtcgcagctcttctcctgcccagaggagctggaaggc
ttccatgcagacagtaaggacctgttggacctggtggaagacagcggtgagctggctgct
cttctgggctccacactggagtgtcttgacgaccgctgggaccacccaggggacaaactg
aaggacaaaatcaaggccattgggaagttgggctcatcctga
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integrated database retrieval system