Etheostoma cragini (Arkansas darter): 117954596
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Entry
117954596 CDS
T07493
Symbol
dnai4
Name
(RefSeq) WD repeat-containing protein 78 isoform X1
KO
K24723
dynein axonemal intermediate chain 4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117954596 (dnai4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ecra03037
]
117954596 (dnai4)
04812 Cytoskeleton proteins [BR:
ecra04812
]
117954596 (dnai4)
Cilium and associated proteins [BR:
ecra03037
]
Motile cilia and associated proteins
Dynein arm
117954596 (dnai4)
Cytoskeleton proteins [BR:
ecra04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
117954596 (dnai4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
DUF896
Rax2
Motif
Other DBs
NCBI-GeneID:
117954596
NCBI-ProteinID:
XP_034744414
LinkDB
All DBs
Position
12:3017764..3029323
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AA seq
787 aa
AA seq
DB search
MSTSVANDDKNKRRALVLRPSSRTLNISVSGTHGANQSARDTYSVVGSPSRKSFSLGGGS
KVLEKSTIQAQRQAVRVFDDEGNDVTPQPLHHADPAAAQAKASRLFLDEISAGSASDQTT
ATGSFAMPFSRYPHSLLGSSRISSQSTIESMNEEIEDTFSKRDMSINFPDVQGKRDTVKE
QVTEDMLKEVIELYISETDSISLLDIPSTVVSVDADEAEPVMERNNQYAEVCRSRMDNDK
YVDLSVQTLNGATKNKQVQTDSIVMGDKATTVTSWDVYDTLNSPEQDEKLSSPELGRTQC
PEAAVDGGRGAERSVSVGSTASTASAASSLKEVEVLGNSLNAESDLQMIMLSEKFQHCLL
VMERSILGNTFQPQLAAYRQLPIVEDPDSPVKPGRGEQREEDAESPRSPALERLWAFSCE
LSRGSSVSSMAWNKKNPDLLAVGYGELGSSNQKPGLVCCWSLKNPTWPDRVIRCDSAVTS
LDFSSNNPSQLAVGMKDGNIAIYNVKSRDIKACFISSSGCPNRHLDPVWQLRWAQQELSL
TGEEKVESLFSVAADGRISKWFVSNNGLDCIDMMKLKKSHNTKKKAGGSTKEKKTESVLS
ALTPGLCFDFHPKDPSVYLVGTWEGLIHKCSCSNSQQFLETYRKHFCPVNRITWSPLSPD
VFLSCSADWTIQLWKQDHHKPVLGFTSTQRTVCDVKWSPKWATVFGAVNEGQLEIWDLNS
SVLDPVIVQPAAAGVTMKSLLFATQTDCVLVGDSDGQVTVYRLRDLCVGDSSQVDILEGI
IHSATPG
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgtctgtggcaaacgacgataagaacaagagacgtgctctggttctaaggccg
tcttctcggacattaaatatctcagtgtcaggcacacatggagccaaccaaagtgcaaga
gacacatacagcgtcgtcggttctccgagcaggaaaagtttcagcctgggtggtggcagc
aaagttctggagaagagcaccattcaagctcaaagacaagctgttcgggtgtttgatgat
gaaggcaatgatgtcactcctcagccgctgcaccatgccgatccagcagctgcgcaggcc
aaagccagcaggttgtttctggatgaaatctctgctggatccgcatcagatcagacaaca
gccaccgggagctttgctatgcctttctccaggtacccccactcattgttaggtagcagc
agaatatccagccagtctaccatagagtccatgaatgaggagattgaggacacgttttcc
aaacgggacatgtccatcaacttcccagatgtgcaggggaaaagagacactgtgaaagaa
caggtgacagaagacatgttgaaagaggtcatagaactctacatctcagagacagacagc
atttcactgctggacatacccagcaccgttgtgtcagtggacgccgatgaagcagaacct
gtcatggagagaaacaatcagtatgcggaggtttgcaggagcagaatggacaacgataag
tatgtggatctgtcggtgcagacgttgaatggagcaactaaaaacaaacaggtccagacc
gacagcattgtcatgggggacaaagccacgactgttaccagctgggatgtgtatgatacg
ttgaacagccctgagcaggatgaaaagctgagcagccctgaactggggaggactcagtgt
cccgaggcggctgtggacggtggccgaggtgcagagaggagcgtgtcagtgggcagcaca
gccagcacagccagtgctgccagctcattgaaagaagtggaggtgcttgggaacagtcta
aacgctgagtcagacttgcagatgatcatgctgtcagagaaattccaacactgcttacta
gtgatggagaggagcattctgggaaacactttccaaccccagctggctgcttacagacag
ctgcccatagtagaagacccagacagtccagtgaagcctgggaggggggagcagagggag
gaggatgcagagagccccagatctccggccctggagcgtctctgggcttttagctgtgag
ctcagccgagggagcagcgtcagcagcatggcctggaacaagaagaacccggaccttctg
gctgtgggctatggtgagttaggctccagtaaccagaaaccaggtctggtgtgctgctgg
tctctcaaaaatcccacgtggccggaccgtgtcatccgctgtgacagcgctgtgacttct
ctggatttctcatccaataaccccagtcagctagctgtgggcatgaaagatggcaacatc
gctatctacaacgtgaagagtcgagacatcaaggcttgtttcatcagcagcagtggatgt
cccaacaggcacttggatccagtgtggcagctcaggtgggcccaacaggagttgagtctg
acaggagaagagaaggtggaatctctgttttctgtggctgcagatggaaggatcagcaag
tggtttgtcagcaacaatggcctcgactgcatagacatgatgaaactgaagaagagtcat
aacacaaagaagaaggctggggggagcaccaaagagaagaagacagaaagtgttctgtca
gcactgactcccggtctctgctttgacttccatccaaaagatcccagtgtctacttggtt
ggcacatgggaaggtctcatccacaaatgctcctgttccaacagtcagcagttcctggag
acatacaggaagcacttttgtcctgtgaaccgcatcacatggagtccactcagtccagat
gtgttcctgagctgctcggctgactggaccatccagctgtggaagcaggaccaccataag
cccgtgttgggcttcacctccacccagagaacagtgtgcgacgtgaagtggtcccctaaa
tgggcaacagtattcggagccgttaatgagggacagctggagatctgggacctgaattca
agcgtcttggacccagtcattgtgcagcctgctgctgctggtgtgacgatgaagtccctg
ctgttcgccactcagacagactgtgtcctggtcggagacagcgatggacaggtgacggtc
taccggctcagggatctctgtgtgggagacagcagccaggtggatattctggagggcatc
atccactctgcgactcctggatag
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