Etheostoma cragini (Arkansas darter): 117954605
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Entry
117954605 CDS
T07493
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117954605
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117954605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
PRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_10
Gp58
TMEM106_N
DDE_Tnp_IS240
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
117954605
NCBI-ProteinID:
XP_034744433
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Position
12:complement(1844457..1846156)
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AA seq
554 aa
AA seq
DB search
MPVEMAQSGVQLDRETFSCVICLDLLKDPVTILCGHSYCMNCIKRHWDEENGKKIYSCPQ
CRKTLTPRPVLLKDTMLAVLVEELKKTGLQAAPVDHCYAGPEDVACDVCTGRKLKAVKSC
LVCLVSYCDQHLQPHYVSPAFDKHKLVEPSKKLQNNFCSRHDEVMKMFCRTDQQCICYLC
SVDEHKGHNTVSAAAERTERQKELEESRENIQQRIQDREKDVKLLQQQAEAINRSADKVV
EDSEKIFTELIRLMEKRRSNVEQNVRLHQKSEVSRVKELQEKLEQEITELKRKDAEMKKL
SDTEDHNQFLHNYSSLSPLGESTSSIDLRPQRYFEDVTATVSELRDKLQGITGEKWTNIF
EVDVSLQQPEPKIRADFLKYSCELTLDPHTVNRHLVLSQGNQKATSFIEEQSYPSHPDRF
TDCRQVLSRESLTGRCYWEVEWGGRGAHVAVAYKNISRAQSSGQCGFGFNDKSWALDCYR
RSFLHNKVQTPVPGPVSSRLGVYLDHSAGTLSFYSVSDDTMTLLHRVQTTFTQPLHAGLW
LLSCGTTAKFCKTK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggagatggcacagtcaggagttcagctggaccgggaaaccttctcttgtgtg
atctgtctggatctcctgaaggatccggtgactattctctgtggacacagctactgcatg
aactgtatcaaacgccactgggatgaagagaatgggaagaaaatctacagctgtcctcag
tgtaggaagaccctcacaccgaggcctgtcttgctgaaagacaccatgttagcagttcta
gtggaggagctgaagaagactggactccaagctgctcctgttgatcactgctatgctgga
cctgaagatgtggcctgtgatgtctgcactgggagaaaactgaaagcagtcaagtcctgt
ctggtgtgtctggtctcttactgtgatcaacaccttcagcctcattatgtctcccctgcg
tttgataaacacaagctggtggagccgtccaagaagctccaaaataacttctgctctcgt
catgatgaggtgatgaagatgttctgccgtactgatcagcagtgtatctgttatctctgc
tctgtggatgaacataaaggccacaacacagtctcagctgcagcagaaaggactgagagg
cagaaagagcttgaggagagtcgagagaacatccagcagagaatccaggaccgagagaaa
gatgtgaagctgcttcaacagcaggcggaggccatcaatcgctctgctgataaagtagtg
gaggacagcgagaagatcttcaccgagctgatccgtctcatggagaaaagacgctccaat
gtggagcaaaatgtccgattgcatcagaaaagtgaggtgagtcgagtcaaagagcttcag
gagaagctggagcaggagatcactgagctgaagaggaaagacgctgagatgaagaagctc
tcagacacagaggatcacaaccagtttctccacaactactcctcactgtcaccactcggt
gaatctacatccagcatagatctccgtcctcagcgctactttgaggatgtgacagcaact
gtgtcagaattaagagataaactacaaggcattacgggagagaaatggacgaatatcttc
gaagtggatgtttcactgcaacaaccagagccaaagatcagagctgacttcttaaaatat
tcatgtgaactcacactggatccacacacagtgaaccggcatctggtattatctcagggg
aaccaaaaagcaacatcattcatagaagaacagtcttatcctagtcacccggacagattc
actgactgtcgacaggtcctgagtagagagagtctgaccggacgttgctactgggaggtg
gagtggggggggagaggagctcatgtagcagtcgcatacaagaacatcagcagagcacag
agctcgggtcaatgtggatttggattcaatgacaagtcttgggcgttagactgttacaga
agaagttttttgcacaacaaagtccaaactcccgtcccaggtcctgtgtcctccagacta
ggagtgtacctggatcacagcgccggtaccctgtccttctacagcgtctctgatgacacc
atgaccctcctccacagagtccagactacgttcactcagccgctccacgctggactttgg
ctcttatcttgtggcaccactgctaagttctgtaaaaccaagtag
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