Etheostoma cragini (Arkansas darter): 117955405
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Entry
117955405 CDS
T07493
Symbol
ftr82
Name
(RefSeq) finTRIM family, member 82 isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117955405 (ftr82)
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117955405 (ftr82)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_6
zf-RING_10
PI3K_P85_iSH2
DivIVA
DUF5446
Motif
Other DBs
NCBI-GeneID:
117955405
NCBI-ProteinID:
XP_034745776
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Position
13:complement(953165..958352)
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AA seq
572 aa
AA seq
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MADHTSPDYFSCSLCVNLLRDPVAIPCGHSFCMDCISGYWNEADYTGIYICPQCKITFTQ
RPVLRPNATLSMVAEKIKKSGLNLNLNLTQGNFYAGPSDVPCDFCSGKKLKAVKSCLNCL
ASYCEKHLKPHYESATFKRHKLVDELGNLDRKICPQHQKPLELFCRTDQMCICAICTVSE
HKGHDIVSAEAERGEKQKLLGVSQAEIRQKCQDRVKELEELKTAVDSLKNSAQRAMVDSQ
KMFEDMIRSIERMRSEVTKLIGINEKAAFNQSEALIERLEQEIDELKKKETGLKQLYSTE
DHIHFLQNFNYLCTPTDDGFIPKVVLNPDFSFGAVRKAVSEIKERLEEFGKEELLKISKS
VNEVPVYTTESRTLERRSRGKEMVDNTPPEPKSRADFVKYFCQLKLDSNTAYKELYVSDN
NRKVIRTRDLQPYADGPERFDSFAQVLCREALSGGRFYWEIEWSGEFSIGVAYKSISRKG
KGSLCLLGYNDKSWSLLCSDTGYSAWHNRVDKAVSGPHSPRIGVYLDHSAGVLAFYTIGN
TMTLLHRFQTTFVEPIYPGFGVGTSVRICNIK
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcacacttctccagattatttcagctgctccctgtgtgtgaacctgctgagg
gaccctgttgctatcccctgtggccacagtttctgtatggactgcatcagtggttactgg
aatgaggctgactacacagggatttacatttgtccccagtgtaagattacattcacccag
aggccggtgctgcggcccaacgccactctgagcatggtggctgagaagatcaagaagagc
ggtctgaacctcaacctcaacttaacccaggggaacttctacgccggaccgagtgacgtc
ccctgtgacttctgctctgggaagaaattaaaggctgtgaagtcctgtctgaactgcctg
gcgtcctactgcgagaagcacctgaagccacactacgaatcagccacattcaaaaggcat
aagctggtggacgagctgggaaacctggacaggaagatctgcccgcagcaccagaagccc
ctggagctcttttgtcgaacagaccagatgtgtatctgcgctatctgcacagtcagtgaa
cacaagggtcatgacattgtctctgctgaggcggagaggggtgagaaacagaaactcctg
ggagtctcccaagctgagattagacagaaatgccaggacagggtgaaggagctagaggaa
ctgaagactgctgtggattcattgaagaactcggcccagagagccatggtggacagccag
aagatgtttgaggacatgatccgctccattgagaggatgaggtccgaggtgaccaagctg
attggcatcaacgagaaggcagctttcaaccagtccgaggcgctgatcgagcgactggaa
caagagatcgatgaactgaagaaaaaagagaccggcctcaagcagctctacagcactgag
gaccacatccacttcctgcagaactttaactacctgtgcacccccactgatgatggcttc
ataccgaaagtggttttgaaccctgacttctccttcggggctgttaggaaagctgtgagc
gagatcaaggagcgcctggaggagtttggcaaagaggagctgcttaagatctccaagtca
gtgaatgaggtcccagtgtacactacggagagtcgaacactggagagaaggagcagaggc
aaagaaatggtggacaacactcctccagagccgaagagcagggccgacttcgtaaaatac
ttctgccagctgaagctggattctaacacagcctacaaggagctgtacgtctcagacaac
aacaggaaagtcatccgcaccagggacctgcagccctacgcggacggcccagagaggttc
gacagcttcgcccaggtgctgtgccgggaggccctgtcgggggggcgcttctactgggag
atcgagtggagtggggagttctccatcggagtggcctacaagagcatcagccggaagggc
aaaggctcactgtgtctgctgggatacaacgacaaatcctggagtctgctctgctccgac
acgggttactctgcctggcacaaccgggtggacaaagccgtcagtggcccccactccccc
cggataggcgtgtacctggaccacagcgctggtgtgctggcgttttacaccatcggcaac
accatgaccctgctgcacaggtttcagactacgtttgttgagcctatctacccaggcttt
ggagttggaacctcagtcaggatctgcaatatcaagtga
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