Etheostoma cragini (Arkansas darter): 117955979
Help
Entry
117955979 CDS
T07493
Symbol
sim2
Name
(RefSeq) single-minded homolog 2
KO
K09100
single-minded
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117955979 (sim2)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117955979 (sim2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
PAS_9
HLH
PAS_4
Per3-like_PAS-A
Motif
Other DBs
NCBI-GeneID:
117955979
NCBI-ProteinID:
XP_034746698
LinkDB
All DBs
Position
13:2479686..2501320
Genome browser
AA seq
775 aa
AA seq
DB search
MGNGSAETNFYARVIYVKFPEMKEKCKNAAKTRREKENGEFYELAKLLPLPAAITSQLDK
ASIIRLTSSYLKMRAVFPDGLGDGWGQATRFSPLDSMAKELGSHLLQTLDGFVFVVASDG
KIMYISETASVHLGLSQVELTGNSIFEYIHPSDHDEMTAVLGLCQPPHHHFSPEYEMERS
FFLRMKCVLAKRNAGLTCGGYKVIHCSGYLKVRQYMMDMALYESSYQTVGLVAVGHSLPP
SGITEIKLHSNMFMFRASLDLKLIFLDTRVAELTGFEPQDLIEKTLYHHVHGCDIFHLRY
AHHLLLVKGQVTTKYYRMLSKHGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDIECKG
MQLSEDQSRATKPGLGLPSTQDHRKQLRTKAVKMKPKPRAAPYPEVGPPLGLQSEQKQAA
SVFQPDCLSCSPQSRPWKERSPYPLAPCREKSSSLSPEAGQVSGCGPTYNLTLRYPYNHR
HLDAQSQMPCSGPSSQLAQQIIGSLHSRGSVGWNISSPPAPNKYTGPVLAADRRYPDDLY
HDCPSSTNPHATSRLKEEPYEHYMLVHGEVSELCPHPRPHANKDSKPLNPEVQHHTRGGE
GPGGFPLLSGLVRGKAEQGPLPNGGQPLPVQMALEQRRRRCMMEAPYSPPAAGYPHPADG
PQHQQYGAAAELLQPRAAGDDRRMFIGMGVGVGLPAQAPYMSLNFHKALGKNGSIKAPAF
TTLSHMEDGHSCRGKETASYSCNSQSQSPSSGSSPDSHREIPHYIGTSVIITNER
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacggctcagcggagaccaacttttacgcacgagtcatttatgtgaaatttcca
gagatgaaggagaaatgcaagaacgcggcgaagacgcggagagagaaggagaacggagag
ttttatgagctggccaagctgctgcctctgccggcggccatcacctcccagctggacaag
gcctccatcatccgactgaccagcagctacctcaagatgagggcagtgttccccgacggt
ctgggtgatggatggggtcaggcaacaaggttcagtcctctggacagcatggctaaagaa
ctgggctcccaccttttgcagactctggatggctttgtgtttgttgttgcctctgatgga
aaaatcatgtacatttctgaaacagcatccgtccacctgggcctgtcccaggtggagctg
acaggaaacagtatatttgagtacatccacccatcggaccatgatgagatgacagcagtg
ctgggtctgtgccagcccccacaccatcacttctctccggagtatgaaatggagcgctcc
ttcttcctgaggatgaagtgtgtacttgctaaacgaaacgcaggacttacatgtggggga
tataaggtgatccactgcagcggctacctgaaagtgcgtcagtacatgatggacatggcg
ctgtatgaatccagttatcagaccgtgggcctggtggcggtcggtcactccctgcccccc
agtggtatcaccgagatcaaactccacagcaacatgttcatgttccgggccagcctggac
ttaaaactcattttcctggacacaagggtggcagagctgacaggctttgagcctcaggac
ctgatagagaagactctctaccaccacgtccacggctgtgacattttccacctgcgctat
gctcaccatttattactggtaaaggggcaggtcaccactaagtactaccgcatgttatca
aagcatggaggctgggtgtgggtgcagagctacgccaccatcgtccacaacagccgctcc
tccagacctcactgtattgtcagcgtgaactatgtcctcactgacatcgaatgcaagggg
atgcagttatccgaagaccagagtcgagccactaagcctggtctcggtctcccttccacc
caggaccaccgcaaacaactccgaaccaaagcagtcaagatgaagcccaaacccagagca
gctccctatcctgaggtgggacctcctcttggcttacagagtgaacaaaagcaggccgct
agcgtcttccagccggactgcttgagctgctccccacagagcaggccgtggaaggagcga
tccccgtatccgctcgccccctgcagggagaaaagctccagcttgagccctgaagcaggc
caggtgtccggctgcggccccacttacaacctgaccctgcgctacccctacaatcaccga
catctggatgctcagagccagatgccgtgctccggcccgtcctctcagcttgctcagcag
atcatcggctccctgcacagcagagggtctgttggctggaacataagcagccccccagca
cccaacaaatacacaggccctgtgctggcagctgaccgtaggtaccctgatgatctctac
catgattgtcccagcagtaccaacccacatgctaccagcaggctgaaggaagaaccctac
gaacactacatgctcgtccacggcgaggtgtctgagctctgtccacacccccgccctcac
gctaacaaggacagcaagcctttaaacccggaggtgcaacatcacacaagaggtggagag
gggcctggaggcttccctttgctcagcggcctggtacggggtaaagctgagcagggcccg
ctgcccaatgggggccagcctctccctgtgcagatggcgctggagcagaggaggaggcgg
tgcatgatggaggctccgtacagccccccggctgcaggatacccacaccctgccgacggc
ccccagcaccagcagtacggagcagccgcggagctgctgcagcccagagctgctggggac
gaccggaggatgttcataggtatgggggtcggggtgggacttccagcccaagctccatac
atgtctttgaacttccataaggccttgggcaaaaacggttcaattaaagcccccgctttc
accacactgagccatatggaagatggccacagttgtcgcggtaaagagacggcttcttac
agctgtaacagccagagccagagtcccagctcgggctcgtcccccgacagccacagagag
atcccgcattacatcggcacctccgttatcatcacaaatgagaggtga
DBGET
integrated database retrieval system
