Etheostoma cragini (Arkansas darter): 117956585
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Entry
117956585 CDS
T07493
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03022
Basal transcription factors
ecra03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117956585 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
117956585 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecra03021
]
117956585 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
ecra03400
]
117956585 (gtf2h4)
Transcription machinery [BR:
ecra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117956585 (gtf2h4)
DNA repair and recombination proteins [BR:
ecra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117956585 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
DUF1522
Motif
Other DBs
NCBI-GeneID:
117956585
NCBI-ProteinID:
XP_034747600
LinkDB
All DBs
Position
14:complement(8254013..8267618)
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AA seq
465 aa
AA seq
DB search
MKLRVHLQCKNLHEYLRELSPEILDRLYNHPATCLAVYRDLPSLAKNYVMRMLFLDQPLP
QAALALWVKIDSQKDHDECVSVLAGLRLWHSQQLQGGLQGYILNPVFKDNLRIALLGGGK
AWADEGSSLGPDRHARDIESLDRYAIERWEVILHFMVGSPCAAVSQDLAQLLVQAGLMKS
EAGEAPYITSAGFQFLLLDTASQLWYFTLQYLKTAQSRGMELVEILSFLFQLSFSTLGRD
YSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLAAGVTTSSSSSSSSTLAS
PPGTGDTGFIVVETNYRIYAYTNSDLQIALVALFSEMLYRFPNVVVAQVTRESVQQAIAN
GITAQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLRFSEGVLYNQFLSQVD
FEVLRDRAQGLGCLVWQDVAQRVMVVSPQGHSEVKRFWKRQKSST
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaagctacgtgtccatctgcagtgtaagaatctgcatgaatacctgcgagagctgagt
cctgaaatattggaccgactgtacaaccacccagcaacatgtctggctgtctacagggac
ctcccctctctggccaagaactatgtgatgcgtatgctgttcctggaccagcctctcccg
caggcagcactggcattgtgggtgaaaatagacagtcagaaggatcatgatgagtgtgtc
tcggtgttggcaggactccgcctttggcacagccagcagctgcaggggggtctgcaaggc
tacattttaaatccagtgttcaaagacaacctgaggatagctctgctcggcgggggcaaa
gcgtgggcagatgagggcagctcactgggtcccgaccgccacgcacgggacatcgagagt
ctggaccgctacgccatcgagcgctgggaggtcatcctgcatttcatggtgggttctccc
tgtgctgctgtcagtcaggacctggctcagctgctggtccaagcaggcctcatgaaaagt
gaagcaggagaggcgccatacatcacctcggcgggattccagttcctgctgctggacaca
gcttctcagctgtggtacttcaccctgcagtacctcaaaaccgctcagtccagagggatg
gaactggtggagatcctgtcattcttattccaactcagcttctccactcttggcagagat
tactcggtggagggcatgagcgagtcattactcaccttcctgcagcacctgcgggagttt
gggctggtgttccagaggaagaggaagtcgcggcggtattacccgaccaggctagccatc
actctggctgcaggagtcactaccagctcgtcctcgtcctcctcctctactctggcctcc
ccccctggtactggagacaccggcttcattgtggtagaaaccaattatcgcatctacgcc
tacacaaactcggaccttcagatcgctctggtggctctgttcagtgaaatgctctaccgc
ttccccaatgtagtggttgcccaggtaaccagggagtcggtgcagcaggccatcgccaac
ggcatcacagcacagcagattatccacttcctgaggaccagagctcaccctgtcatgctc
aaacagactcctgtgctgcctccgaccatcactgatcagatccgcctgtgggagctagag
agagaccgactgcgcttctcagagggagttctctacaaccaattcctctcccaggtcgac
ttcgaagtgctgcgagacagagctcagggtctgggctgtctggtgtggcaggacgtggct
cagagggtgatggtggtgtcgccgcagggacacagcgaggtcaagaggttctggaaacga
cagaagtccagtacgtaa
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