Etheostoma cragini (Arkansas darter): 117957434
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Entry
117957434 CDS
T07493
Symbol
lmx1al
Name
(RefSeq) LIM homeobox transcription factor 1-alpha
KO
K09371
LIM homeobox transcription factor 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117957434 (lmx1al)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
117957434 (lmx1al)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117957434
NCBI-ProteinID:
XP_034749056
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Position
15:11682445..11700115
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AA seq
410 aa
AA seq
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MLPTEISGGVCFTSSDHTEGRREGMKTEGSPQPCQQQPPSSTPFGPEYRGGGEVCAGCES
PIADRFLLRVNERSWHETCVKCAVCLSSLTGTCYCRDRLLYCKHDYEKLFVRKCSACLQV
IGRSELIMRVLGQVYHLGCFTCCECERRLQRGDEFVLKEGQLLCRMDYEKEREMLAAISP
TPTESVKSEDEDGGGGSGGGKGGDEGKEHKRSKRPRTILTTQQRRAFKASFEVSAKPCRK
VRETLAAETGLTVRVVQVWFQNQRAKMKKIARRQQQQQQQQQEQEQLGGTRRGAGRGGRQ
SNDDSEDGSSTHGMDGMLGYPSLPRQQLLALDPNIYGGEPFRHGLTPPQLSSEQLHPYDS
ETVFHDLDSDGSLGHLGDCLLATGDGSLLPGRVGNPIDRLYSMQNSYFTS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgttgccaaccgagatttcaggaggagtgtgtttcacctcaagcgatcacactgaggga
cggagagaagggatgaaaacagagggaagcccgcagccctgtcagcagcagcctccatcc
tcaacgcctttcggtccggagtacagaggagggggagaggtgtgtgcgggctgcgagtct
cccatcgccgaccgcttcctgttgcgcgtgaacgagcgctcctggcacgagacctgcgtc
aagtgcgccgtgtgtttgagctcgctcaccgggacctgttactgtagggatcgcctgctg
tactgcaagcacgactatgaaaagctgtttgtaagaaagtgcagtgcatgcctgcaggtg
attggacgttcagagctgataatgcgtgtgctaggccaggtgtaccacctgggctgcttc
acctgctgtgagtgtgaacgccggctgcaaagaggtgatgagtttgtgctgaaagaaggc
cagctgctctgccgcatggactatgagaaggagagggaaatgctggctgctattagtccg
acaccaaccgaatcagtgaaaagtgaggatgaggacgggggaggaggttccggcggaggg
aaaggtggtgatgaaggcaaggagcacaagcgttcaaaacgaccacgcaccatcttgacc
acacagcagcgccgtgctttcaaggcctcctttgaagtgtctgctaagccttgccgcaag
gtgagagagacactggctgctgagacagggctgacagtgcgtgttgtacaagtgtggttt
caaaaccagagagccaagatgaaaaagatagctcgaagacagcagcaacagcaacagcag
cagcaggaacaagagcagctgggagggaccaggagaggagcaggtagagggggccgccag
agcaatgacgacagtgaggatggctctagtacccatggcatggatgggatgctgggatat
ccttctctgccacgtcagcaactactcgctctggaccccaacatctacgggggagagcca
tttcgacacgggcttacaccacctcagctaagcagcgagcagctccacccctatgactca
gagaccgtgttccatgacctggacagcgatggaagccttggtcaccttggagactgcctc
ttggcaacgggggacggtagtctcctgccagggcgagtgggaaatccaattgaccgcctc
tactccatgcagaactcctacttcacctcctga
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