Etheostoma cragini (Arkansas darter): 117957836
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Entry
117957836 CDS
T07493
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecra03041
]
117957836
Spliceosome [BR:
ecra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117957836
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
117957836
NCBI-ProteinID:
XP_034749789
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Position
15:complement(2714807..2758724)
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AA seq
475 aa
AA seq
DB search
MLMSTDVASIMIPVSRGIMERDIDTTAGPLGNAAGGPAAVRGMKRGDPEPDAQTAAALTD
FAVAECKRPRIDGTGSVVGDIGQNNEPLNPGFHGYPPHSQGSQDSTGGQEGLVAPPFSPF
PPPPPPQNGLAGTEFVPGAMFGGGGQGPAELGAGANGAPTNTTTTNNNGKTEEGSQGEVG
LQCGTGGSGSGGSVGDPSEAKGTPKRLHVSNIPFRFRDPDLRQMFGQYGKILDVEIIFNE
RGSKGFGFVTFETSADAEKAREKLHGTLVEGRKIEVNNATARVMTNKKMVSPYPNGEALS
TLPYAGWKLSPMMGAVYGPEIYAVPGFPYPSAAAAATTAAAAFRGAHLRGRGRPVYSAVR
AAVPQPAIPTYPGVVYQDGFYGAADLYGGYPAAAAAAAAAAYRYAQPAAVTGATAAAAAY
SDSYGRVYTTDPYHALTPAAAAYGVGAMQQSLSVEGLMALQASLYRAGYSRFAPY
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatctataatgatacccgttagtcggggaataatggaa
agagacattgatacgacagccggaccccttggaaacgcggccgggggtccagcagctgtc
cgggggatgaagcgaggagacccggagcccgacgctcaaacagcagctgccctgacggac
tttgccgtggcggagtgcaaaagacccagaatagacggaaccgggagtgttgttggtgat
attggacagaacaatgagcctttaaaccccggtttccatggatacccaccccacagtcag
ggctctcaggattcaacaggaggacaggagggattggtggccccgcccttttcaccgttc
cctcctccaccccctcctcaaaacgggctagcagggacagagtttgtcccaggggccatg
tttggtggtggaggccaaggcccagcagagttaggggctggtgctaatggagcccccacc
aataccaccaccaccaacaacaacggaaagacagaagaggggtcccagggtgaggtgggc
ctacagtgcggcacaggaggctcaggatctggaggctctgtgggagacccctccgaggcc
aaagggacccccaaacgcctccacgtctcaaacatccccttccgctttcgggaccctgac
ctcaggcagatgtttgggcaatatgggaagatcttggatgtagagattattttcaatgag
agaggatcaaagggttttggctttgtgacatttgagaccagcgcagacgcagagaaagcc
agggaaaagctccacggcacattggtggaaggtcgtaagattgaggtgaataatgccaca
gccagggtgatgaccaacaagaaaatggtcagcccctaccctaatggagaggctctcagc
acgctgccttatgcggggtggaagttgagtcctatgatgggggccgtgtacggaccagag
atctacgcagtcccagggtttccctatccttcagcagcggcagcggccaccacagcagcc
gccgccttccgcggtgcccacctccggggccgaggccggccggtctacagtgctgtgcgg
gctgccgtgcctcagcctgccatcccgacctaccccggtgtggtgtatcaggatgggttt
tacggagctgcagacttatatggaggctaccctgctgctgctgctgctgccgccgccgcc
gcttatcgctacgcccagccggccgccgtaaccggagcaaccgccgcagctgccgcctac
agcgacagttatggccgggtgtacactacagatccctaccacgctttaactccagccgct
gctgcttacggagtgggagcaatgcagcaatcattgtctgtagaaggactcatggcactg
caagccagtttataccgggcaggatacagtaggtttgctccttactaa
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