Etheostoma cragini (Arkansas darter): 117960320
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Entry
117960320 CDS
T07493
Symbol
pcgf5a
Name
(RefSeq) polycomb group RING finger protein 5-A isoform X1
KO
K11489
polycomb group RING finger protein 5
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117960320 (pcgf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117960320 (pcgf5a)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
117960320 (pcgf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_4
zf-RING_UBOX
zf-RING_5
zf-Nse
zf-RING_10
zf-rbx1
zf-RING_6
TRAF3_RING
zf-C3HC4_3
Actin_micro
zf-C3HC4_5
DUF1272
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
117960320
NCBI-ProteinID:
XP_034754043
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All DBs
Position
17:1776068..1795222
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AA seq
249 aa
AA seq
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MAATGRKHMVKDFNHFITCYLCRGYLIKPTTVTECLHTFCKSCIVQHFEESNDCPKCGIQ
VHETNPLEMLRLDNTLEEIIFKLVPGLREKEEQQEVEFWKKNQPRENGQAENVRCQRLGL
PDVGGDYGGGGGGGDEDDDGSNEDFHRSDPQIAICLDCLRNTGQSGESTVTDLMKRFIRC
SSRVTVGTIKKFLSLKLKLPSSYELDVLCNGEIMGRDHTLEFIYMTRWRLHGENTYPMVL
EYRPRIDFG
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacaggaaggaagcacatggtgaaagactttaaccatttcatcacctgttac
ctgtgccgaggttacctgattaaaccgaccacggtcaccgagtgcctgcacaccttctgt
aagagctgtattgtgcagcactttgaggagagcaacgactgccctaaatgtggcattcag
gtacatgagaccaatccactggagatgctaaggttggacaacaccctggaggagatcatt
ttcaagctggtgcccggactcagagaaaaagaggaacagcaggaagttgaattctggaag
aagaaccagcccagagaaaacggccaagcagaaaatgtgaggtgtcagaggctcgggctg
cctgatgttggaggagactatggcggcggtggtggtggtggtgatgaagatgatgacggc
agcaatgaagacttccacaggagtgaccctcagatagccatctgtctggactgcttacgc
aacacaggacagtcgggggagagcactgtcacggatttaatgaagaggttcatccgctgc
tccagtagagtcacagtgggaacaatcaagaagtttctcagtctcaaactaaagctgcct
agctcttatgagctggatgtgctgtgtaacggagagatcatgggcagagatcacactctg
gagttcatctacatgacccggtggaggctccatggagagaatacgtatcccatggttctt
gagtaccggccacgaatcgactttggctga
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integrated database retrieval system
